Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 1e-23
>seq1
Length=1805414
Score = 125 bits (138), Expect = 1e-23
Identities = 367/559 (66%), Gaps = 10/559 (2%)
Strand=Plus/Minus
Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676
||||||||||| || | |||||| || | ||| | ||||| || || |||||
Sbjct 289939 CAGGCGAAGTCGGTGTGCATGCCCTCGTCACGGGAAATGAGCTCGTTGGAGAAGGTGAGG 289880
Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736
|| ||||| || || ||||| |||||||| || || || || || || ||||| |||||
Sbjct 289879 CCGGGCATCAGCCCGCGCTTCTTGAGCCAGAAGATAGCGGCGAACGAACCAGAGAAGAAA 289820
Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACT---TGTATCATTATGT 39793
||||| || || ||||| || || | || | ||| | | || || |
Sbjct 289819 ATGCCCTCGACAGCTGCGAAGGCGATGAGACGGCAGCCGAAGGTCGATGCGTCGTCGCTG 289760
Query 39794 ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 39853
|||||||| ||||||| | || ||||| | || || || | || ||||| |||
Sbjct 289759 ATCCACTTTAGTGCCCAGTTGGCCTTCTTGCGGATGCACGGGATATTGTCGATAGCGTTA 289700
Query 39854 AAGAGATAATGTTTTTCATC-ACTATCTTTAACATATGTATCTATTAACAGACTATACAT 39912
||||| || ||| | | | || | | || || || || | || || |
Sbjct 289699 AAGAGGTA-TGTGCGTTGGCGAGGTTCGCTGATGTAGGTGTCGATAAGTAGTGAGTAGGT 289641
Query 39913 TTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 39972
|| || ||||| || || ||| ||||| || ||||| || || | || |||| ||
Sbjct 289640 CTCGGAGTGGATATTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCAGGGAT 289581
Query 39973 TTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGC 40032
||| ||||| || ||||| || ||| || || || || || || || |||||
Sbjct 289580 TTGCACCTCGCCACTAAATCGCTCGACCAGGTTCTCGTTGACGATGCCGTCTGATGCGGC 289521
Query 40033 AAAAAATGCCAATACATGTTTAATAAAATAT---TTTTCATCGGGTGTCAAT-TTATTCC 40088
|| || || | |||||| ||| || || | ||||| || | || ||||
Sbjct 289520 GAAGAAGGCAAGCACATGTGAAATGAAGAATCGCTCGTCATCAT-TGAGACGCTTGTTCC 289462
Query 40089 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148
|||| | | |||||| || | ||| | || || |||||||| || || ||||||||||
Sbjct 289461 AGTCGTGCAGATCTTTCGACAGATCAATCTCCTCTGCTGTCCAGAATGATGCCTCTGCCT 289402
Query 40149 TTTTGTACATGTTCCATAT 40167
| |||||||| | ||||||
Sbjct 289401 TCTTGTACATCTGCCATAT 289383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686906507441880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |