Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq228 132 4e-26
seq184 111 1e-19
>seq228
Length=1254254
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
||||| ||||| |||| ||||| || | ||| || || || ||||| ||||||||||||
Sbjct 555558 CCTCCACGCAAACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTC 555617
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | || |||| || | ||| ||||| ||| | || |||||||| ||||| || ||
Sbjct 555618 AACGTCCGGCCGTCCTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCTGGTGGG 555677
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| |||||| ||||| ||||| |||| | | || | ||||||| | ||| ||
Sbjct 555678 ATACCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATTGTGTCTGATGATTCCACC 555737
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || || | ||||| || ||||| || || ||||||||||||
Sbjct 555738 TCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAGATTTGCATA 555785
>seq184
Length=1511567
Score = 111 bits (122), Expect = 1e-19
Identities = 171/243 (70%), Gaps = 1/243 (0%)
Strand=Plus/Plus
Query 27007 TTTCATAATTATTGCC-TCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGA 27065
|| || | ||| |||| ||| |||| || | ||||| || | ||| || || || ||
Sbjct 735458 TTGCACATTTACTGCCCTCCACGCAGACGTAGCACCAAGTGCAGCGTCGACTCCTTCTGG 735517
Query 27066 ATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGC 27125
|| ||||||||||||| | | |||| || | ||| || |||||| | |||||||||
Sbjct 735518 ATGTTGTAGTCGCTCAAAGTCCTGCCGTCCTCCAACTGCTTCCCGGCGAAGATGAGACGC 735577
Query 27126 TGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTG 27185
|| || || || || | |||||| ||||| ||||| |||| | | || | |||
Sbjct 735578 TGCTGGTCTGGTGGGATACCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATCGTG 735637
Query 27186 TCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGC 27245
|||| | ||| || || || || || | ||||| || ||||| || || || ||||||
Sbjct 735638 TCTGATGATTCCACCTCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATTTGC 735697
Query 27246 ATA 27248
|||
Sbjct 735698 ATA 735700
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424933017236904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |