Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq198 87.8 6e-12 seq176 87.8 6e-12 >seq198 Length=398492 Score = 87.8 bits (96), Expect = 6e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 254979 TACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAAC 255038 |||| ||| | || |||||||||||| ||| | || ||||| || || ||| ||| | Sbjct 354618 TACCCATGCTACGGGTGTTCAACAACACTGCTAGGTATGTCGACCAGGGTGGCAACAAGC 354677 Query 255039 GCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACAT 255084 | || || || ||| |||||||||| |||||||||||||| ||||| Sbjct 354678 GACCCGGCGCATTCGCCATCTACCTCGAGCCGTGGCACGCAGACAT 354723 >seq176 Length=738521 Score = 87.8 bits (96), Expect = 6e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 254979 TACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAAC 255038 |||| ||| | || |||||||||||| |||| | || ||||| || || ||| ||| | Sbjct 358604 TACCCATGCTACGGGTGTTCAACAACACGGCTAGATATGTCGACCAGGGCGGCAACAAGC 358663 Query 255039 GCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACAT 255084 | || || ||||| |||||||||| ||||| |||||||| ||||| Sbjct 358664 GTCCCGGCGCGTTTGCCATCTACCTTGAGCCATGGCACGCAGACAT 358709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588330566401815