Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq198 163 4e-35
seq112 145 9e-30
seq1 134 2e-26
>seq198
Length=398492
Score = 163 bits (180), Expect = 4e-35
Identities = 572/876 (65%), Gaps = 38/876 (4%)
Strand=Plus/Minus
Query 118694 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 118753
||| || |||| || || | || || || || ||||||| || || | | ||
Sbjct 355162 GACGTATGTAGGCAGAGCCAGAGATGCAAGGTTGCACACAGCTACTTCGTCAGGAGCGGT 355103
Query 118754 GTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 118813
|||||| || || || ||||||||||| || || ||| |||||||||||||| || ||
Sbjct 355102 GTACTCGATGATCTCGGTGCACAAGTTGGAGCTGCGAATTGTGCCCAAGTTCTTCTGGTT 355043
Query 118814 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 118873
||| ||| || || ||||| |||||||| || | || ||||| || || |
Sbjct 355042 GCTCTTGCGGTTGGCAGCGTCTTTGTACAGCATGTACGGGTTGCCAGTCTCGGTCTGAGC 354983
Query 118874 CTTGAGAATAGCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCT--CT 118931
|| |||||| || | ||| | || | | ||| | || | | ||| ||| | ||
Sbjct 354982 CTCGAGAATGGCATACCAAA--TCTTCTG--GGCGC----GCATAGTCTCACCCTTGCCT 354931
Query 118932 TCC---TCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCT 118988
|| |||||| ||||||||| ||||| ||||| || || | || | || ||
Sbjct 354930 TCGCTTTCGTACCGTGTGTAGAGCGCTTCGAACTCATCCCCGTACACATCGGCAAGGCCG 354871
Query 118989 GGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAG 119048
|| || | ||||| | || | ||| | | | || | || ||||||||||||
Sbjct 354870 GGGCACTCGTTCGGGCACATCAGTGTCCAATCAGCGTTATCTTGCACACGCTTCATGAAG 354811
Query 119049 AGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGA 119108
|| || |||||||| || || |||| | || ||| ||| | || || | || ||
Sbjct 354810 AGATCAGGGATCCACAGAGCGTAGAACAAGTCACGAGCGCGGACCTCCTCCTTGCCGTGG 354751
Query 119109 TTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCG 119168
|| |||| || | ||| || ||| || ||||||||||| || ||||| | |||
Sbjct 354750 TTCTTGCGCAGGTCAAGGAAGGACAAGATGTCTGCGTGCCACGGCTCGAGGTAGATGGCG 354691
Query 119169 ATTGACCC------CTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAAT 119222
| || || ||| | | ||| |||||| |||||||| |||||| ||| ||
Sbjct 354690 AATGCGCCGGGTCGCTT--GTTG-CCACCCTGGTCGACATACCTAGCAGTGTTGTTGAAC 354634
Query 119223 ACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA--TACGAGACT 119280
|| || ||||| || | || ||| | ||| ||||||||| ||| || |||||| |
Sbjct 354633 ACCCGTAGCATGGGTACGAGACCGTTTGATGTGCCATTTGTACCCGCAATGTACGAGCC- 354575
Query 119281 TATTGGCTCTGACATCGTGGATGTGC----ATACCAATACCCCCTGCCCACTTTGAGATT 119336
| | || | || || ||||||| | || || || || || || |||||
Sbjct 354574 -AGTCGC-CCGA-AT--GCGATGTGCGTTGAGTCCGATGCCACCGGCGTTTTTCGAGATC 354520
Query 119337 TGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATG 119396
||| || | | || || |||| || || || || ||| |||| | ||||
Sbjct 354519 ATCGCACAAGTCTTCAGCGTGTCGTAAATGCCCTCAATGCTGTCGTCCTTCATGTCGATC 354460
Query 119397 AGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGC 119455
|||||||| | | ||| || || ||||| |||||| |||| || || || | ||
Sbjct 354459 AGGAAGCATGAAGCAAGTTG-TGCTTGAGGTGTGCCAGCGCTGAACAGCGTCGGCGAAGC 354401
Query 119456 GTGGATGAACATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTT 119514
|| |||| |||| | | |||||| | || ||| ||||| | | || |||||| |
Sbjct 354400 ATGTGTGAA-ATACTTGTTGGACATGTAGTTGTACGTCTCGATCGCCGCATCAATGTCCT 354342
Query 119515 CCCCGTGAATACCGATCGAGACCCGCATAAACATGT 119550
| ||||| ||||| | | ||| ||||| | |||||
Sbjct 354341 CGCCGTGTATACCTACAGCGACACGCATGATCATGT 354306
>seq112
Length=1778705
Score = 145 bits (160), Expect = 9e-30
Identities = 534/815 (66%), Gaps = 21/815 (3%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| || || ||||||||||||||||||||||| ||| | | | ||| ||||||||
Sbjct 1417149 TAGTCACCTACGCGCTTCTCGAAGAAGTTTGTCTTGCCGGCGAGGGAGATGTTCTCCATG 1417090
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCA--AATTGCTGGCACTCCAATCTGTTTGAGGAGAC 129845
|| || || ||||| | | || | | |||||| | | | | | ||| ||||
Sbjct 1417089 AAGTCGAAGGGGTTGGTGGCATTGTAGTACTTGCTGTGGC-CGAGTGCGAG-GAGTAGAC 1417032
Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905
| || | ||| |||| ||||||| |||| || || |||||| |||| || |
Sbjct 1417031 GGTCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGAAGTGCGC 1416972
Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965
| || || |||||| | | |||| | | ||| || || || || || | ||| ||
Sbjct 1416971 AGGGCAGGGCGTCCGATAGGAACTCTTGCTCGATCTCGACGGCCTCGGTGATGATCTGGT 1416912
Query 129966 GAATGGTCTCC-GTGCCAGGTCTATTGCGCAAA-GT-CTTGAAGAGTTCCACGGCAAACT 130022
| | | || ||| | | | ||||| | | || | || || | | |||||| |
Sbjct 1416911 GGACGAGGTCGAGTGATGGCT-TGTTGCGGAGATGTGCGTGCAGCATGCA--GGCAAAGT 1416855
Query 130023 CCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGA 130082
| ||| | ||||||||||| |||||||| ||||| ||||| || || |||||||
Sbjct 1416854 CGGTGTGCATGCCCTCGTCACGCGAGATGAGCTCATTAGAGAACGTGAGGCCGGGCATGA 1416795
Query 130083 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCA 130142
| || |||||||| | |||||| || ||| || ||||| ||||||||||| ||||| |
Sbjct 1416794 GGCCGCGCTTCTTGAGCCAGAAGATGGCAGCGAAGGAGCCGGAGAAGAAGATACCCTCAA 1416735
Query 130143 CACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC-AAACCACTTC 130201
|| ||||| || | ||||| |||| | | || | | || | | ||||||
Sbjct 1416734 CAGCTGCGAAGGCGATAAGACG-GCAGCCGAAGGTCGATGCGTCGTCGCTGATCCACTTT 1416676
Query 130202 ATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGA-GTTC 130260
| ||||| | ||||| || ||| || |||| | | | ||| || | |||| ||
Sbjct 1416675 AGTGCCCAGTTAGCCTTCTTGCGGATGCAGGGGATGTTGTCGATAGCGTTGAAGAGGTAT 1416616
Query 130261 CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATG 130320
| | || || || || ||||||| | || |||||| ||| || || ||| ||
Sbjct 1416615 GTGCGTTGGCGA-GGTTCGCTGATGTAGGTGTCGATGAGTAGTGAGTAGGTCTCGGAGTG 1416557
Query 130321 GACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCT 130379
|| | | ||| || | ||| | ||||||| |||| || ||| ||| || ||||
Sbjct 1416556 GATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGGTATTTGCACCT 1416498
Query 130380 CATCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAAC 130438
| | | ||| | | | ||||| ||||| || || || | || || ||
Sbjct 1416497 C-GCCACTGAATCGCTCGACCAGGTTCTCGTTGACAATGCCGTCTGATGCGGCGAAGAAG 1416439
Query 130439 GCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCA 130495
|| |||| || | ||||| | || | ||||| | | | ||||||||||
Sbjct 1416438 GCAAGGACATGCGAAATGAAGAATCGCTCGTCATCGTTGAGACGCTTGTTCCAGTCGTGC 1416379
Query 130496 AGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530
|| |||||||| ||||| | |||||| || |||||
Sbjct 1416378 AGGTCCTTCGACAGATCGATCTCCTCTGCTGTCCA 1416344
>seq1
Length=1805414
Score = 134 bits (148), Expect = 2e-26
Identities = 302/443 (68%), Gaps = 12/443 (3%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| || || ||||||||||||||||| ||||| ||| | | | ||| ||||||||
Sbjct 290224 TAGTCACCTACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGCGAGGGAGATGTTCTCCATG 290165
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCA--AATTGCTGGCACTCCAATCTGTTTGAGGAGAC 129845
|| || || ||||| | | ||| | | |||||| | | | | | ||| || |
Sbjct 290164 AAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGCTGTGGC-CGAGTGCGAG-GAGTAGGC 290107
Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905
| || | |||| |||| ||||||| |||| || || |||||| |||| || |
Sbjct 290106 GGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGAAGTGCGC 290047
Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965
| || || ||||| | | |||| | | ||| || || ||||||||| | ||| ||
Sbjct 290046 AGGGTAGGGCGTCTGAAAGGAACTCTTGCTCGATCTCGACAGCTTCCGTGATGATCTGGT 289987
Query 129966 GAAT--GGTCTCCGTGCCAGGTCTATTGCGCAAA-GT-CTTGAAGAGTTCCACGGCAAAC 130021
| | |||| ||| | | | ||||| | | || | || || | | ||| ||
Sbjct 289986 GGACAAGGTCGA-GTGATGGCT-TGTTGCGGAGATGTGCGTGCAGCATACA--GGCGAAG 289931
Query 130022 TCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 130081
|| ||| | |||||||||||||| ||||| || || |||||| || || |||||
Sbjct 289930 TCGGTGTGCATGCCCTCGTCACGGGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATC 289871
Query 130082 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 130141
|| || |||||||| | |||||| || || || || ||||||||||| || |||||
Sbjct 289870 AGCCCGCGCTTCTTGAGCCAGAAGATAGCGGCGAACGAACCAGAGAAGAAAATGCCCTCG 289811
Query 130142 ACACACGCGAACGCAAAGAGACG 130164
||| ||||| || | ||||||
Sbjct 289810 ACAGCTGCGAAGGCGATGAGACG 289788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618433135972520
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