Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq181 91.5 1e-13
seq101 82.4 7e-11
>seq181
Length=738230
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/213 (70%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 34642 GCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGC 34701
|||||| |||||||| | |||||||| | || ||||||||||||||||| |||||
Sbjct 657740 GCTCTACCAACGATCTTGCGACATGGGACTCGGCGTGCCGTTCAACATTGCCTCGTACGC 657799
Query 34702 TCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATAC 34761
|| || || ||||| |||| | | || || ||| | ||||| |||| ||||||
Sbjct 657800 GCTACTTACACACATGCTCGCGCGTTGCGCGGACTTGATCCCTGGCACGCTGACGCATAC 657859
Query 34762 GTTGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAGCTGCAACG 34821
|||| ||||| || | || || ||||| ||| |||| | ||| | |||
Sbjct 657860 CATGGGCGATGCACACGTATATCTCGACCACCGCGAAGCGCTCGAGCAGCAGAT--CACG 657917
Query 34822 A--GAGCCCCGACCGTTCCCCCAGCTCAAAATT 34852
| | ||| || ||||||| |||||||||||
Sbjct 657918 AGGGTGCCGAGAGCGTTCCCTGAGCTCAAAATT 657950
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/213 (70%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 6493 AATTTTGAGCTGGGGGAACGGTCGGGGCTC--TCGTTGCAGCTGGATCCGGAGCCGCTCG 6550
||||||||||| ||||||| || ||| | |||| | ||| | |||| |||
Sbjct 657950 AATTTTGAGCTCAGGGAACGCTCTCGGCACCCTCGTG--ATCTGCTGCTCGAGCGCTTCG 657893
Query 6551 ATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAAC 6610
||||| || || | || ||||| |||| |||||| |||| ||||| | |||
Sbjct 657892 CGGTGGTCGAGATATACGTGTGCATCGCCCATGGTATGCGTCAGCGTGCCAGGGATCAAG 657833
Query 6611 CCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACC 6670
|| || | | |||| ||||| || || || ||||| |||||||||||||||||
Sbjct 657832 TCCGCGCAACGCGCGAGCATGTGTGTAAGTAGCGCGTACGAGGCAATGTTGAACGGCACG 657773
Query 6671 CCTAACCCCATGTCTCCCGATCGTTGATAGAGC 6703
|| | |||||||| | |||||||| ||||||
Sbjct 657772 CCGAGTCCCATGTCGCAAGATCGTTGGTAGAGC 657740
>seq101
Length=921267
Score = 82.4 bits (90), Expect = 7e-11
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 34385 CGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAG 34444
|| ||||| ||||| | || || |||||||| ||||||||| | ||||| || || |||
Sbjct 837472 CGCGAGGAAGGCGATCTCGGACCAGTCTACGGCTTCCAGTGGCGGCACTTCGGCGCTGAG 837531
Query 34445 TATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTG 34492
|| | || || | ||||||||| | || |||| ||||||||||||
Sbjct 837532 TACCAGGACTGCCATGCGGACTATACTGGCAAGGGTGCGGACCAGCTG 837579
Score = 82.4 bits (90), Expect = 7e-11
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 6853 CAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAA 6912
|||||||||||| |||| || | ||||||||| | || || | ||||| || || ||
Sbjct 837579 CAGCTGGTCCGCACCCTTGCCAGTATAGTCCGCATGGCAGTCCTGGTACTCAGCGCCGAA 837520
Query 6913 GTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCG 6960
||| | ||||||||| |||||||| || || | ||||| ||||| ||
Sbjct 837519 GTGCCGCCACTGGAAGCCGTAGACTGGTCCGAGATCGCCTTCCTCGCG 837472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448260903924240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |