Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1 181 9e-41 >seq1 Length=1805414 Score = 181 bits (200), Expect = 9e-41 Identities = 554/852 (65%), Gaps = 11/852 (1%) Strand=Plus/Minus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| || ||||| || ||| ||||| |||||||| || || ||||| | | Sbjct 290239 ACACCAGCCTTCTGGTAGTCACCTACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGCGAGG 290180 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGA 4367 || || || ||||| || || || || || || |||||||| | || || Sbjct 290179 GAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGCTGTGGCCGAGT 290120 Query 4368 GCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATT 4427 || | || | |||||||| || || || || ||||||| |||||| | | ||| || Sbjct 290119 GCGAGGAGTAGGCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATG 290060 Query 4428 CCAATTAATCTCACAGG-TAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTC 4486 || | | | | |||| ||| |||| || | |||||||| || || || ||||| Sbjct 290059 CCGAGAAGTG-CGCAGGGTAGGGCGTCTGAAAGGAACTCTTGCTCGATCTCGACAGCTTC 290001 Query 4487 TGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAA 4546 ||||| || | | | || ||||| || || | | | | || | Sbjct 290000 CGTGATGATCTGGTGGACAAGGTCGAGTGATGGCTTGTTGCGGAGATGTGCGTGCAGCAT 289941 Query 4547 ACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAA 4606 ||| || || || |||| || ||||| | | ||| || ||||| || || || | Sbjct 289940 ACAGGCGAAGTCGGTGTGCATGCCCTCGTCACGGGAAATGAGCTCGTTGGAGAAGGTGAG 289881 Query 4607 TCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAA 4666 |||||||| | || | ||| || ||||| || |||||||| || || ||||| ||||| Sbjct 289880 GCCGGGCATCAGCCCGCGCTTCTTGAGCCAGAAGATAGCGGCGAACGAACCAGAGAAGAA 289821 Query 4667 TATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTT 4726 ||||| || || || || || || | | ||| | ||||| | || | ||| | Sbjct 289820 AATGCCCTCGACAGCTGCGAAGGCGATGAGACGGCAGCCGAAGGTCGATGCGTCGTCGCT 289761 Query 4727 AATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTT 4786 ||||| |||| ||||||||| || || || | |||||| || ||| |||||||| Sbjct 289760 GATCCACTTTAGTGCCCAGTTGGCCTTCTTGCGGATGCACGGGATATTGTCGATAGCGTT 289701 Query 4787 AAATA---ATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843 ||| | || | | || | || || || || ||||| || ||||| || Sbjct 289700 AAAGAGGTATGTGCGTTGGCGA---GGTTCGCTGATGTAGGTGTCGATAAGTAGTGAGTA 289644 Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGT 4903 | || || || ||||| || || ||||| || ||||| ||||| | ||| || | Sbjct 289643 GGTCTCGGAGTGGATATTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCAGG 289584 Query 4904 TACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963 | ||| || ||| || ||||| || || | ||| ||||| || || ||||| || Sbjct 289583 GATTTGCACCTCGCCACTAAATCGCTCGACCAGGTTCTCGTTGACGATGCCGTCTGATGC 289524 Query 4964 TGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTT---AAGTTTTTT 5020 || || || || | ||||| || || ||| | | |||||| || | | || || Sbjct 289523 GGCGAAGAAGGCAAGCACATGTGAAATGAAGAATCGCTCGTCATCATTGAGACGCTTGTT 289464 Query 5021 CCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 ||||| | ||| |||||| | | ||||| || || | ||||| || || || || || Sbjct 289463 CCAGTCGTGCAGATCTTTCGACAGATCAATCTCCTCTGCTGTCCAGAATGATGCCTCTGC 289404 Query 5081 TTTTTTGTACAT 5092 || |||||||| Sbjct 289403 CTTCTTGTACAT 289392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427048210353911