Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq228 122 2e-22
seq184 118 2e-21
seq207 107 4e-18
seq204 102 2e-16
>seq228
Length=1254254
Score = 122 bits (134), Expect = 2e-22
Identities = 150/205 (73%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| ||||| || || ||||| || |||||||||||||||| | || | |||||
Sbjct 556028 GAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATC 556087
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || ||||||||||| | | ||||||||| | || ||| || || || ||
Sbjct 556088 CTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGCGGGATGCCCTCTTTGTC 556147
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
||| || || |||||| | || | | |||| || ||||| || ||||| || || ||
Sbjct 556148 TTGGATCTTGCTCTTGACATTGTCGATGGTGTCGGAGCTCTCCACCTCAAGGGTGATGGT 556207
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAG 152096
||||| || | ||||| ||||||
Sbjct 556208 CTTGCCGGTCAAGGTCTTTACGAAG 556232
Score = 104 bits (114), Expect = 5e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| || || ||||| || || || ||||||||||| |||| | ||| | || ||
Sbjct 555801 AGGACGAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGACCGTCC 555860
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||||||||| || | ||||||||| | | || || ||||| ||
Sbjct 555861 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCCTCCTTATCC 555920
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || || || | || | | |||| || ||| || || || || || ||
Sbjct 555921 TGGATCTTCGACTTCACGTTGTCGATGGTGTCGGAGGACTCAACCTCGAGGGTGATGGTC 555980
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| ||||| ||||| ||||||| ||||||
Sbjct 555981 TTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 556012
Score = 84.2 bits (92), Expect = 5e-11
Identities = 144/208 (69%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| || || |||||||| ||| || || | || || || |
Sbjct 555578 CAAG-TGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTCAACGTCCGGCCGTCCTCCA 555636
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || ||||||||||| | |||||| || | | ||| || ||||| || ||||
Sbjct 555637 ACTGCTTACCAGCGAAGATAAGACGCTGCTGATCTGGTGGGATACCCTCCTTATCCTGAA 555696
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || || || | || | ||||||| || || || || || || || ||||
Sbjct 555697 TCTTCGACTTCACGTTGTCGATTGTGTCTGATGATTCCACCTCGAGCGTGATGGTCTTGC 555756
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| ||||||||||| ||||||| |||||
Sbjct 555757 CTGTGAGAGTCTTGACGAAGATTTGCAT 555784
>seq184
Length=1511567
Score = 118 bits (130), Expect = 2e-21
Identities = 149/205 (73%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| |||||||| || |||||||| ||||||||||| |||| | || | |||||
Sbjct 735943 GAGGACGAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 736002
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || ||||||||||| | | ||||||||| | | || || ||||| ||
Sbjct 736003 CTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTC 736062
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
||| || || |||||| | || | | |||| || ||||| || ||||| || || ||
Sbjct 736063 TTGGATCTTGCTCTTGACATTGTCGATGGTGTCGGAGCTCTCCACCTCAAGGGTGATGGT 736122
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAG 152096
||||| || | || || ||||||
Sbjct 736123 CTTGCCGGTCAAGGTTTTGACGAAG 736147
Score = 102 bits (112), Expect = 2e-16
Identities = 148/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| || ||||||||||| ||| ||||| || || || || |
Sbjct 735493 CAAG-TGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTCCTGCCGTCCTCCA 735551
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|||||||||||||| || | ||||||||| | | ||| || ||||| || ||||
Sbjct 735552 ACTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCTGGTGGGATACCCTCCTTATCCTGAA 735611
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || || || | || | ||||||| || || || || || || || ||||
Sbjct 735612 TCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACCTCGAGCGTGATGGTCTTGC 735671
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| ||||||||||| ||||| | |||||
Sbjct 735672 CTGTGAGAGTCTTGACGAAAATTTGCAT 735699
>seq207
Length=296016
Score = 107 bits (118), Expect = 4e-18
Identities = 134/182 (74%), Gaps = 4/182 (2%)
Strand=Plus/Plus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGA 151974
|| ||||||||||||||| | || |||||||| || || ||||| |||||||| |
Sbjct 212927 TTCTGGATGTTGTAATCGCTCAGTGTCCTCCCATCCTCAAGCTGCTTT--CCGGCGAAAA 212984
Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034
| | || ||||||||| | || |||||| ||||| || || || || |||||| | |
Sbjct 212985 TCAACCGCTGCTGGTCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 213044
Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094
| | |||| || ||| || || || || || || ||||||||||| ||||| ||||
Sbjct 213045 CGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 213104
Query 152095 AG 152096
||
Sbjct 213105 AG 213106
>seq204
Length=319970
Score = 102 bits (112), Expect = 2e-16
Identities = 133/182 (73%), Gaps = 4/182 (2%)
Strand=Plus/Minus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGA 151974
|| |||||||||||||| | || || ||||| || || ||||| |||||||| |
Sbjct 82044 TTCTGGATGTTGTAATCACTCAGTGTCCTGCCATCCTCAAGCTGCTTT--CCGGCGAAAA 81987
Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034
| | | ||||||||| | || |||||| ||||| || || || || |||||| | |
Sbjct 81986 TCAAGCGCTGCTGGTCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 81927
Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094
| | |||| || ||| || ||||| || ||||| ||||||||||| ||||| ||||
Sbjct 81926 CGATCGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGA 81867
Query 152095 AG 152096
||
Sbjct 81866 AG 81865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153816852851157
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |