Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq184 168 1e-36 seq228 159 7e-34 seq207 123 5e-23 seq204 120 6e-22 seq193 107 4e-18 seq1 100 6e-16 seq112 95.1 3e-14 >seq184 Length=1511567 Score = 168 bits (186), Expect = 1e-36 Identities = 173/221 (78%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || ||||| | ||| ||||| |||||||||||||| | Sbjct 735928 ACCACCACGCAGACGGAGGACGAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGA 735987 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || ||||| |||||||| || || ||||| || Sbjct 735988 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGAGG 736047 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCT-TCG 283049 ||| |||||||||||||||||| ||||| || || | ||||| |||| || |||| || Sbjct 736048 AATGCCCTCCTTGTCTTGGATC-TTGCTCTTGACATTGTCGATGGTGT-CGGAGCTCTCC 736105 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || || || ||||| ||||| || ||||| || || ||||| Sbjct 736106 ACCTCAAGGGTGATGGTCTTGCCGGTCAAGGTTTTGACGAA 736146 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || |||||||| || || || | || || || |||||||| ||||| | Sbjct 735700 ACCACCGCGGAGGCGAAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTATAGTCGGA 735759 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| ||||| || ||||| || || | || |||||||| || Sbjct 735760 AAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAAATGAGGCGCTGTTGGTCTGGAGG 735819 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| |||||||| | || ||| | ||||| ||||| || | || || Sbjct 735820 AATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGGATGACTCAAC 735879 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 735880 CTCGAGGGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 735927 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| || || |||| || | ||| || || |||||||||||||| Sbjct 735473 CCTCCACGCAGACGTAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 735532 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | || | ||| ||||| | || |||||||| ||||| | ||| || ||||| || Sbjct 735533 AAAGTCCTGCCGTCCTCCAACTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCTGGTGGG 735592 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||| || || ||||| | || ||| | ||||| ||||| || | ||| || Sbjct 735593 ATACCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACC 735652 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | |||||| ||||| || ||||| Sbjct 735653 TCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATTTGCAT 735699 >seq228 Length=1254254 Score = 159 bits (176), Expect = 7e-34 Identities = 171/221 (77%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || ||||| | ||| || || ||||||||||| || | Sbjct 556013 ACCACCACGCAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGA 556072 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || ||||| |||||||| || || ||||| ||| Sbjct 556073 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGCGG 556132 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCT-TCG 283049 || ||||| |||||||||||| ||||| || || | ||||| |||| || |||| || Sbjct 556133 GATGCCCTCTTTGTCTTGGATC-TTGCTCTTGACATTGTCGATGGTGT-CGGAGCTCTCC 556190 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || || || ||||| ||||| || ||||| ||||| ||||| Sbjct 556191 ACCTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTTACGAA 556231 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || |||||||| || || || | || ||| || |||||||||||||| | Sbjct 555785 ACCACCGCGGAGGCGAAGGACGAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGA 555844 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || || || ||||| || || || ||||| ||||| | || || ||||| || Sbjct 555845 AAGAGTACGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGG 555904 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||| || |||||||| | || ||| | ||||| ||||| || | || || Sbjct 555905 AATACCCTCCTTATCCTGGATCTTCGACTTCACGTTGTCGATGGTGTCGGAGGACTCAAC 555964 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 555965 CTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 556012 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||||| || || |||| || | ||| || || || ||||||||||| Sbjct 555558 CCTCCACGCAAACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTC 555617 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | ||| ||||| ||||| | || || || || ||||| | ||| || || || || Sbjct 555618 AACGTCCGGCCGTCCTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCTGGTGGG 555677 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||| || || ||||| | || ||| | ||||| ||||| || | ||| || Sbjct 555678 ATACCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATTGTGTCTGATGATTCCACC 555737 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | |||||| ||||| || ||||| Sbjct 555738 TCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAGATTTGCAT 555784 Score = 114 bits (126), Expect = 3e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || ||||| || | || || || |||||||||||||| | Sbjct 1165074 ACCACCACGGAGGCGCAGGACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 1165015 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| || || || ||||| |||||||| || || |||||| || Sbjct 1165014 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGTGG 1164955 Query 282992 AATACCCTCCTTGTCT 283007 ||||||||||||||| Sbjct 1164954 GATACCCTCCTTGTCT 1164939 >seq207 Length=296016 Score = 123 bits (136), Expect = 5e-23 Identities = 137/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || ||||||||||| || || || | |||||||| || || || ||||| || ||| Sbjct 212927 TTCTGGATGTTGTAATCGCTCAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCGAAAATC 212986 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATC 283030 || || || ||||| ||| || ||||||||||| |||||| ||||| || || | || Sbjct 212987 AACCGCTGCTGGTCTGGCGGGATTCCCTCCTTGTCCTGGATC-TTGCTCTTGACATTGTC 213045 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| |||||||| | ||||| ||||| ||||| ||||| ||||| | ||||| ||||| Sbjct 213046 GATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 213105 >seq204 Length=319970 Score = 120 bits (132), Expect = 6e-22 Identities = 136/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || ||||||||||| ||| || || | ||||||||| || || || ||||| || ||| Sbjct 82044 TTCTGGATGTTGTAATCACTCAGTGTCCTGCCATCCTCAAGCTGCTTTCCGGCGAAAATC 81985 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATC 283030 || || || ||||| ||| || ||||||||||| |||||| ||||| || || | || Sbjct 81984 AAGCGCTGCTGGTCTGGCGGGATTCCCTCCTTGTCCTGGATC-TTGCTCTTGACATTGTC 81926 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| ||||| || | || || || || ||||| ||||| ||||| | ||||| ||||| Sbjct 81925 GATCGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAA 81866 >seq193 Length=432561 Score = 107 bits (118), Expect = 4e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || | || | || ||||| |||||||||||||| | Sbjct 90585 ACCACCACGGAGGCGCAGGACTAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGGA 90644 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || ||||| |||||||| || || |||||| || Sbjct 90645 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGTGG 90704 Query 282992 AATACCCTCCTTGTCTTGG 283010 ||||||||||||||| || Sbjct 90705 GATACCCTCCTTGTCTAGG 90723 >seq1 Length=1805414 Score = 100 bits (110), Expect = 6e-16 Identities = 175/252 (69%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 230160 CAAATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGC 230219 || ||| |||| |||| || | | || | |||||| ||| ||||| | || ||| Sbjct 289989 CAGATCATCACGGAAGCTGTCGAGATCGAGCAAGAGTTCCTTTCAGACGCCCTACCCTGC 290048 Query 230220 CGTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGT 230279 ||| |||||||||| || | |||||| | || || ||||| ||||| ||||| || Sbjct 290049 GCACTTCTCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCTGACCGC 290108 Query 230280 ATTTTCGTGGCGCTAGGGTACGAGAAAGTG-TATAACTCCAAGAACCCCTTCGCTTTTAT 230338 | || | || || || || || |||| || ||| ||| |||||||||| || || Sbjct 290109 CTACTCCTCGCACTCGGCCAC-AGCAAGTACTACAACGCCACCAACCCCTTCGACTTCAT 290167 Query 230339 GGAGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCA 230398 |||| ||| || ||| || || || ||||||||||| ||||| || | || || || Sbjct 290168 GGAGAACATCTCCCTCGCCGGCAAGACGAACTTCTTCGAGAAGCGCGTAGGTGACTACCA 290227 Query 230399 AAGGCCCGGTGT 230410 | | | ||||| Sbjct 290228 GAAGGCTGGTGT 290239 >seq112 Length=1778705 Score = 95.1 bits (104), Expect = 3e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 230193 GAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGG 230252 |||||| | | ||||| | || ||| ||| |||||||||| || | |||||| | Sbjct 1416947 GAGTTCCTATCGGACGCCCTGCCCTGCGCACTTCTCGGCATGAACGCCAAGCTCATGTGC 1417006 Query 230253 CAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTG-TA 230311 || || ||||| || || ||||| ||| | || | || || || || || |||| || Sbjct 1417007 CAGTACATCGAGTTTGTCGCTGACCGTCTACTCCTCGCACTCGGCCAC-AGCAAGTACTA 1417065 Query 230312 TAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTT 230371 || ||| |||||||||| || |||||| ||| || ||| || || || ||||| Sbjct 1417066 CAATGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGCCGGCAAGACAAACTT 1417125 Query 230372 CTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 |||||| ||||| || | || || |||| | | ||||| Sbjct 1417126 CTTCGAGAAGCGCGTAGGTGACTACCAAAAGGCTGGTGT 1417164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046735619170618