Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201 7-04-03] 267 sequences; 47,410,550 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq184 163 7e-35 seq228 156 1e-32 seq207 143 6e-29 seq204 134 3e-26 >seq184 Length=1511567 Score = 163 bits (180), Expect = 7e-35 Identities = 160/205 (78%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || ||||||||||| || || ||||| |||||||||||| |||||| Sbjct 735696 CAAATTTTCGTCAAGACTCTCACAGGCAAGACCATCACGCTCGAGGTGGAATCATCAGAC 735637 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||||||||| || || || ||||| || |||||||| Sbjct 735636 ACGATCGACAACGTGAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCAGACCAGCAG 735577 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||| | || || || |||||| | ||| || ||| || Sbjct 735576 CGTCTCATCTTCGCCGGGAAGCAGTTGGAGGACGGCAGGACTTTGAGCGACTACAACATC 735517 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || ||||| |||| Sbjct 735516 CAGAAGGAGTCGACGCTGCA-CTTG 735493 Score = 154 bits (170), Expect = 4e-32 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| ||||| | || || || || |||||||| |||||||| ||||| ||||||||| Sbjct 736146 TTCGTCAAAACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATC 736087 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || ||||| ||||| || ||||| || || || ||||| |||||||| || | Sbjct 736086 GACAATGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCTTG 736027 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 ||||||||||| || |||||||| ||||| | || || |||| || ||| |||| ||| Sbjct 736026 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAA 735967 Query 178110 GAATCAACACTGCATCTTGT 178129 || || || || ||||| || Sbjct 735966 GAGTCCACCCTTCATCTCGT 735947 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || |||||||||||||| || || ||| Sbjct 735924 CAGATCTTCGTCAAGACGCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCATCCGAC 735865 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || || ||||| ||||| || Sbjct 735864 ACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCAGACCAACAG 735805 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || |||||||| || || ||||| || || | |||||| |||| |||||| || Sbjct 735804 CGCCTCATTTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTTTCCGACTATAACATC 735745 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 735744 CAGAAGGAGTCGACTCTCCACCTCGT 735719 >seq228 Length=1254254 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || |||||||||||||| || ||| ||| Sbjct 556009 CAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGAC 555950 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| ||||| || || || || ||||| |||||||| Sbjct 555949 ACCATCGACAACGTGAAGTCGAAGATCCAGGATAAGGAGGGTATTCCTCCAGACCAGCAG 555890 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || | |||||| |||| || ||| || Sbjct 555889 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGTACTCTTTCCGACTACAACATC 555830 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || || || || Sbjct 555829 CAGAAGGAATCGACTCTCCACCTCGT 555804 Score = 154 bits (170), Expect = 4e-32 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || | || || || || |||||||| |||||||| ||||| ||||||||| Sbjct 556231 TTCGTAAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATC 556172 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || ||||| ||||| || |||||||| || ||||| || |||||||| || | Sbjct 556171 GACAATGTCAAGAGCAAGATCCAAGACAAAGAGGGCATCCCGCCAGACCAGCAGCGCTTG 556112 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 ||||||||||| || |||||||| ||||| | || || ||||||| ||| |||| || Sbjct 556111 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGATTACAACATCCAGAAG 556052 Query 178110 GAATCAACACTGCATCTTGT 178129 || || || || ||||| || Sbjct 556051 GAGTCCACCCTCCATCTCGT 556032 Score = 141 bits (156), Expect = 2e-28 Identities = 155/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||||||||| || || ||||| |||||||||||| |||||| Sbjct 555781 CAAATCTTCGTCAAGACTCTCACAGGCAAGACCATCACGCTCGAGGTGGAATCATCAGAC 555722 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||||||||| || || || ||||| || || ||||| Sbjct 555721 ACAATCGACAACGTGAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCAGATCAGCAG 555662 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||| | || || || |||| | ||| || ||| | Sbjct 555661 CGTCTTATCTTCGCTGGTAAGCAGTTGGAGGACGGCCGGACGTTGAGCGACTACAACATT 555602 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || ||||| |||| Sbjct 555601 CAGAAGGAGTCGACGCTGCA-CTTG 555578 >seq207 Length=296016 Score = 143 bits (158), Expect = 6e-29 Identities = 139/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || ||||| || || || |||||||||||||| || ||| ||||| ||| Sbjct 213105 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACGATC 213046 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || ||||| ||||| |||||||| || |||||||| || |||||||| || | Sbjct 213045 GACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCGCCAGACCAGCAGCGGTTG 212986 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 || ||||||||||| ||||| || ||||| ||||| || |||||| ||| |||| || Sbjct 212985 ATTTTCGCCGGAAAGCAGCTTGAGGATGGGAGGACACTGAGCGATTACAACATCCAGAA 212927 >seq204 Length=319970 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || ||||| || || || |||||||| |||||||| || ||||| ||| Sbjct 81866 TTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCCGACACGATC 81925 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || ||||| ||||| |||||||| || |||||||| || |||||||| || | Sbjct 81926 GACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCGCCAGACCAGCAGCGCTTG 81985 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 || ||||||||||| ||||| || ||||| ||||| || ||||| ||| |||| || Sbjct 81986 ATTTTCGCCGGAAAGCAGCTTGAGGATGGCAGGACACTGAGTGATTACAACATCCAGAA 82044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203727082110798