Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq1 154 3e-32
>seq1
Length=3303888
Score = 154 bits (170), Expect = 3e-32
Identities = 304/442 (69%), Gaps = 6/442 (1%)
Strand=Plus/Plus
Query 230202 TGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGG 230261
||| || || ||| | || || || ||| ||| ||||| ||||| ||| ||
Sbjct 494415 TGTCGAGGGCATTTTCTTCTCTGGTTCGTTCGCCGCTATCTTCTGGCTCAAGAAGCGCGG 494474
Query 230262 TGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCA 230321
||||||| |||||| | || |||||| |||| || |||||||| | || ||
Sbjct 494475 GCTGATGCCCGGCCTCACCTTCTCCAACGAGCTCATTTCCCGTGACGAGGGCATGCA-CA 494533
Query 230322 AC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAGACGGTCA 230380
| | |||| | | || | || | |||| ||||||| | || |||| |||
Sbjct 494534 CCGACTTCGCCTGTATGCTGCACGCACATCTCCGCAACAAGCCATCACTCGACCTTGTCC 494593
Query 230381 AACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCAT 230440
| || ||||| || ||||| || || | ||| | |||||| | | ||||| | || |
Sbjct 494594 ACCAGATCATCACGGAAGCTGTCGAGATCGAGCAAGAGTTCCTCTCAGACGCCCTACCCT 494653
Query 230441 GTCGC-CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGAC 230499
| ||| ||| | ||||||||||| | || ||| | ||||||||||| ||||| || |||
Sbjct 494654 G-CGCACTTCTCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCTGAC 494712
Query 230500 CGCATTTTTGTTGCACTTGGTTACGAGAAAGT-GTACAACTCTAAGAACCCCTTTGCATT 230558
||| | | | ||||| || ||| | |||| |||||| | | |||||||| | ||
Sbjct 494713 CGCCTACTCCTCGCACTCGGCCACG-GCAAGTACTACAACGCCACCAACCCCTTCGACTT 494771
Query 230559 TATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTA 230618
|||||| ||| || || || ||||| ||||||||||| ||||| || |||||||
Sbjct 494772 CATGGAGAACATCTCCCTCGCCGGCAAGACGAACTTCTTCGAGAAGCGCGTAGGTGACTA 494831
Query 230619 TCAGAGGCCTGGTGTGATGAAG 230640
|||| | ||||||| ||| ||
Sbjct 494832 CCAGAAGGCTGGTGTCATGGAG 494853
Score = 149 bits (164), Expect = 1e-30
Identities = 303/442 (69%), Gaps = 6/442 (1%)
Strand=Plus/Plus
Query 230202 TGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGG 230261
||| || ||||| | || || || ||| ||||||||| |||||| ||| ||
Sbjct 528782 TGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCGCCATCTTCTGGCTGAAGAAGCGCGG 528841
Query 230262 TGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCA 230321
| ||||| |||||| | || |||||| ||||| || |||||||| | || ||
Sbjct 528842 GCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGCATGCA-CA 528900
Query 230322 AC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAGACGGTCA 230380
| | |||| | | || | || | |||| ||||||| | || |||| |||
Sbjct 528901 CCGACTTCGCCTGCATGCTGCACGCACATCTCCGCAACAAGCCATCACTCGACCTCGTCC 528960
Query 230381 AACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCAT 230440
| || ||||| || ||||| || || | || | |||||| | | ||||| | || |
Sbjct 528961 ACCAGATCATCACGGAAGCTGTCGAGATTGAGCAAGAGTTCCTCTCGGACGCCCTGCCCT 529020
Query 230441 GTCGC-CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGAC 230499
| ||| ||| | ||||||||||| | || ||| | ||||||||||| || || || ||
Sbjct 529021 G-CGCACTTCTCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCTGAT 529079
Query 230500 CGCATTTTTGTTGCACTTGGTTACGAGAAAGT-GTACAACTCTAAGAACCCCTTTGCATT 230558
||| | | | |||||||| || || |||| |||||| | | |||||||| | ||
Sbjct 529080 CGCCTACTCCTCGCACTTGGCCAC-AGCAAGTACTACAACGCCACCAACCCCTTCGACTT 529138
Query 230559 TATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTA 230618
|||||| ||| || || || ||||| ||||||||||| ||||| || |||||||
Sbjct 529139 CATGGAGAACATCTCCCTCGCCGGCAAGACGAACTTCTTCGAGAAGCGCGTAGGTGACTA 529198
Query 230619 TCAGAGGCCTGGTGTGATGAAG 230640
|||| | | ||||| ||| ||
Sbjct 529199 CCAGAAGGCCGGTGTCATGGAG 529220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057820855618160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |