Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1 113 9e-20
>seq1
Length=3303888
Score = 113 bits (124), Expect = 9e-20
Identities = 313/477 (66%), Gaps = 5/477 (1%)
Strand=Plus/Plus
Query 101921 GCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATC 101980
|| || || || || || || |||||||| ||| ||||||| |||| |||||| |
Sbjct 528771 GCTTTCGCAGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCGCCATCTTCTGGCTG 528830
Query 101981 AAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAA 102040
||||| | || | |||| || ||||||| |||||| ||| |||| || | |||||
Sbjct 528831 AAGAAGCGCGGGCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAG 528890
Query 102041 GGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCATCA 102100
|| | || |||||| || ||||||||| | | | | | | ||||||
Sbjct 528891 GGCATGCACACCGACTTCGCCTGCATGCTGCACGCACA---TCTCCGCAACAAGCCATCA 528947
Query 102101 AGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCACA 102160
|| | | | || |||| ||||| ||| ||||| ||||| || ||| |
Sbjct 528948 CTCGACCTCGTCCACCAGATCATCACGGAAGCTGTCGAGATTGAGCAAGAGTTCCTCTCG 529007
Query 102161 GTTTCCCTGCC-TGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGA 102219
| ||||||| || | || | || |||||| |||| | ||| |||||||||| ||
Sbjct 529008 GACGCCCTGCCCTGCGCACTTC-TCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGA 529066
Query 102220 ATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTACCAA 102279
||||| || ||| ||| | | | | | || | ||| |||| || | |||||
Sbjct 529067 GTTTGTCGCTGATCGCCTACTCCTCGCACTTGGCCACAGCAAGTACTACAACGCCACCAA 529126
Query 102280 CCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAGAG 102339
||||||| |||||||| || || ||||||| ||||| ||||| || || ||| |
Sbjct 529127 CCCCTTCGACTTCATGGAGAACATCTCCCTCGCCGGCAAGACGAACTTCTTCGAGAAGCG 529186
Query 102340 AGTCGCCGAGTATCAACGTGCCCAGGTCATGGCTTCTATCAATAAGATCAAGAAGGA 102396
|| | || || || ||| ||||||| || |||||||| ||||| ||
Sbjct 529187 CGTAGGTGACTACCAGAAGGCCGGTGTCATGGAGTCGCACAATAAGAAGAAGAACGA 529243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989581058461560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |