Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq1 116 5e-21
>seq1
Length=3303888
Score = 116 bits (128), Expect = 5e-21
Identities = 367/564 (65%), Gaps = 6/564 (1%)
Strand=Plus/Minus
Query 36151 CATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAA 36210
|| || ||| ||||| ||| ||| | |||||||| | ||| | |||||||| ||
Sbjct 494553 CAGCATACAGGCGAAGTCGGTGTGCATGCCCTCGTCACGGGAAATGAGCTCGTTGGAGAA 494494
Query 36211 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGA 36270
||||| |||||||| || || ||||| || ||||| || || | || || || |||||
Sbjct 494493 GGTGAGGCCGGGCATCAGCCCGCGCTTCTTGAGCCAGAAGATAGCGGCGAACGAACCAGA 494434
Query 36271 AAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTC-TCTCTCCATAACCG--GCACT 36327
|||||||| || || || || ||||||||||| || | | | | || ||
Sbjct 494433 GAAGAAAATGCCCTCGACAGCTGCAAAGGCAATGAGACGGCAGCCGAAGGTCGATGCGTC 494374
Query 36328 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 36387
||| ||||||||| | ||||| | ||||||||| | || || || | || ||
Sbjct 494373 GTCGCTGATCCACTTTAGTGCCCAGTTGGCCTTCTTGCGGATGCACGGGATGTTGTCGAT 494314
Query 36388 AGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACT 36447
|| |||||||| || | || | || | | || || || || | ||
Sbjct 494313 GGCGTTAAAGAGGTATGTGCGTTGGCGAGGTTCGCTGATGTAGGTGTCGATGAGTAGTGA 494254
Query 36448 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTC 36507
|| | || || || || || || || || || || |||||||| || | ||||||
Sbjct 494253 GTAGGTCTCGGAGTGGATATTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTC 494194
Query 36508 GGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACT 36567
| || || || || || ||||| || | | || || || || || |||||
Sbjct 494193 AGGGATTTGCACCTCGCCACTGAATCGCTCGACCAGGTTCTCGTTGACGATGCCGTCTGA 494134
Query 36568 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--TTGGTGTTA-GTTT 36624
|| || || || || | |||||| || || || |||| | || | | ||
Sbjct 494133 TGCGGCGAAGAAGGCAAGCACATGTGAAATGAAGAATCGCTCGTCATCATTGAGACGCTT 494074
Query 36625 ATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTC 36684
||||| || | | |||||| || | ||| | || || ||||||| |||||||||||
Sbjct 494073 GTTCCAGTCGTGCAGATCTTTCGACAGATCAATCTCCTCTGCTGTCCAGAATGATGCCTC 494014
Query 36685 TGCCTTTTTATACATATTCCAGAT 36708
|||||| || ||||| | ||| ||
Sbjct 494013 TGCCTTCTTGTACATCTGCCATAT 493990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658170891298880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |