Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq1 122 1e-22
>seq1
Length=3303888
Score = 122 bits (134), Expect = 1e-22
Identities = 368/564 (65%), Gaps = 6/564 (1%)
Strand=Plus/Minus
Query 42058 CATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAA 42117
|| || ||| ||||| ||| ||||| ||||| || | ||| | |||||||| ||
Sbjct 494553 CAGCATACAGGCGAAGTCGGTGTGCATGCCCTCGTCACGGGAAATGAGCTCGTTGGAGAA 494494
Query 42118 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGA 42177
||||| |||||||| || || ||||| || ||||| || |||| || || || |||||
Sbjct 494493 GGTGAGGCCGGGCATCAGCCCGCGCTTCTTGAGCCAGAAGATAGCGGCGAACGAACCAGA 494434
Query 42178 AAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTC-TCTCTCCATAACCG--GCACT 42234
||||| || || || || || ||||||||||| || | | | | || ||
Sbjct 494433 GAAGAAAATGCCCTCGACAGCTGCAAAGGCAATGAGACGGCAGCCGAAGGTCGATGCGTC 494374
Query 42235 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 42294
||| ||||||||| | ||||| | ||||||||| | || || || | || ||
Sbjct 494373 GTCGCTGATCCACTTTAGTGCCCAGTTGGCCTTCTTGCGGATGCACGGGATGTTGTCGAT 494314
Query 42295 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACT 42354
||| |||||||| || | || | || | | || || ||||| | ||
Sbjct 494313 GGCGTTAAAGAGGTATGTGCGTTGGCGAGGTTCGCTGATGTAGGTGTCGATGAGTAGTGA 494254
Query 42355 ATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTC 42414
|| | || || || || || || || ||||| || |||||||| || | |||||
Sbjct 494253 GTAGGTCTCGGAGTGGATATTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTC 494194
Query 42415 GGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACT 42474
| | || || || || ||||| || | | || ||||| || || |||||
Sbjct 494193 AGGGATTTGCACCTCGCCACTGAATCGCTCGACCAGGTTCTCGTTGACGATGCCGTCTGA 494134
Query 42475 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--CGGTGTTA-ATTT 42531
|| || || || || | |||||| || || || ||||| | || | ||
Sbjct 494133 TGCGGCGAAGAAGGCAAGCACATGTGAAATGAAGAATCGCTCGTCATCATTGAGACGCTT 494074
Query 42532 ATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTC 42591
||||| || | | |||||| || | ||| | || ||| | ||||| |||||||| ||
Sbjct 494073 GTTCCAGTCGTGCAGATCTTTCGACAGATCAATCTCCTCTGCTGTCCAGAATGATGCCTC 494014
Query 42592 TGCCTTTTTATACATATTCCAGAT 42615
|||||| || ||||| | ||| ||
Sbjct 494013 TGCCTTCTTGTACATCTGCCATAT 493990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671137253696320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |