Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq1 257 2e-63
>seq1
Length=3303888
Score = 257 bits (284), Expect = 2e-63
Identities = 573/846 (68%), Gaps = 27/846 (3%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| |||| || || ||||| | || ||| | ||||||
Sbjct 493990 ATATGGCAGATGTACAAGAAGGCAGAGGCATCATTCTGGACAGCAGAGGAGATTGATCTG 494049
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| || || ||| |||| ||| | | ||| | | ||| |||||| || || ||
Sbjct 494050 TCGAAAGATCTGCACGACTGGAACAAGCGTCTCAATGATGACGAGCGATTCTTCATTTCA 494109
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
|| | | |||||||| |||| || || || ||||||||||| || ||| | |||
Sbjct 494110 CATGTGCTTGCCTTCTTCGCCGCATCAGACGGCATCGTCAACGAGAACCTGGTCGAGCGA 494169
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGAT 125257
||| | ||| || || || |||| ||| ||||| ||||| ||||| ||||||||
Sbjct 494170 TTCAGTGGCGAGGTGCAAATCCCTGAGG-CTCGCTGCTTCTACGGCTTCCAGATCATGAT 494228
Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA---TCC 125314
||||| | ||||| || | ||||| ||| || |||| ||||| |||| ||
Sbjct 494229 GGAGAATATCCACTCCGAGACCTACTCACTACTCATCGACACCTACATCAGCGAACCTCG 494288
Query 125315 GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGC 125374
||||| | | || ||||||||||| ||||||| | |||| || || || |||||
Sbjct 494289 CCAACGCACATAC---CTCTTTAACGCCATCGACAACATCCCGTGCATCCGCAAGAAGGC 494345
Query 125375 TCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGC 125434
| |||| | ||||||| |||||| || | | || | | | || | ||
Sbjct 494346 CAACTGGGCACTAAAGTGGATCAGCGACGACGCATCGACCTTCGGCTGCCGTCTCATTGC 494405
Query 125435 ATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAA 125494
|| || || || |||||||| ||||| || ||| || || || ||||| ||||||||
Sbjct 494406 CTTTGCAGCTGTCGAGGGCATTTTCTTCTCTGGTTCGTTCGCCGCTATCTTCTGGCTCAA 494465
Query 125495 GAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGG 125554
||||||||| || |||||||| || || | |||||| | || || || ||||||||
Sbjct 494466 GAAGCGCGGGCTGATGCCCGGCCTCACCTTCTCCAACGAGCTCATTTCCCGTGACGAGGG 494525
Query 125555 CCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATC 125614
| | ||| ||||| ||| | | ||| |||| |||| || | | || | |
Sbjct 494526 CATGCACACCGACTTCGCCTGTATGCTG-CACGCA--CATCTCCG---CAA---CA-AGC 494575
Query 125615 CAGCGAT-GAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTC 125673
|| | | || ||| | | || | || || || || ||| || |||||||| |
Sbjct 494576 CATCACTCGACCTTGTCCACCAGATCATCACGGAAGCTGTCGAGATCGAGCAAGAGTTCC 494635
Query 125674 TAACCGAATCCCTACCGGTCAGCA-TGATTGGCATGAACTGCAAGCTAATGTGCGAGTAC 125732
| | || ||||||| | ||| | | ||||||||| |||||| |||||| |||||
Sbjct 494636 TCTCAGACGCCCTACC-CTGCGCACTTCTCGGCATGAACGCCAAGCTCATGTGCCAGTAC 494694
Query 125733 ATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCC---GCAAGATTTACAAC 125789
|| ||||| || || || || ||||| || | |||| ||||| ||||||
Sbjct 494695 ATCGAGTTCGTCGCTGACCGCCTACTCCTCG---CACTCGGCCACGGCAAGTACTACAAC 494751
Query 125790 GCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTC 125849
|||| || ||||| || |||||| | ||| || || | || ||||| ||||| |||
Sbjct 494752 GCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGCCGGCAAGACGAACTTCTTC 494811
Query 125850 GAGAAG 125855
||||||
Sbjct 494812 GAGAAG 494817
Score = 237 bits (262), Expect = 2e-57
Identities = 571/847 (67%), Gaps = 29/847 (3%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| |||| || || ||||| | || ||| |||| |||
Sbjct 528357 ATATGGCAGATGTACAAGAAGGCAGAGGCATCATTCTGGACAGCAGAGGAGATCGACCTG 528416
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| ||||| ||| |||| ||| | | ||| | | || |||||| || || ||
Sbjct 528417 TCGAAGGATCTGCACGACTGGAACAAGCGTCTCAACGATGACGAGCGATTCTTCATTTCA 528476
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
|| | | |||||||| |||| || || || || |||||||| || ||| | ||
Sbjct 528477 CATGTGCTTGCCTTCTTCGCCGCATCAGACGGCATTGTCAACGAGAACCTGGTCGAGCGC 528536
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGAT 125257
||| | ||| | || || || | ||| ||||| ||||| ||||| ||||||||
Sbjct 528537 TTCAGTGGTGAGGTCCAAATACCCGACGC-TCGCTGCTTCTACGGCTTCCAGATCATGAT 528595
Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGC- 125316
|||||| | ||||| || | ||||| ||| || |||| ||||| | || || |
Sbjct 528596 GGAGAACATCCACTCCGAGACCTACTCACTACTCATCGACACCTACATCAGTGAACCTCG 528655
Query 125317 --AACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGC 125374
|||| | | || ||||| ||||| ||||||| | || | || || || |||||
Sbjct 528656 CCAACGCACATAC---CTCTTCAACGCCATCGACAACATCCCCTGCATCCGCAAGAAGGC 528712
Query 125375 TCAATGGGTGATTCG-GTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433
|||| || | || ||||||| ||||| || | | || | | | || | |
Sbjct 528713 -CAATTGGGCACTCAAGTGGATCAGCGACGATGCATCGACCTTCGGCTGCCGTCTCATCG 528771
Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493
| ||||| || || ||||| |||||||| || || || || |||||||| ||||| |
Sbjct 528772 CTTTCGCAGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCGCCATCTTCTGGCTGA 528831
Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553
|||||||||| ||||||||||| || || | |||||| | || || || |||||||
Sbjct 528832 AGAAGCGCGGGCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGG 528891
Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGAT 125613
|| | ||| ||||| ||| | ||| |||| |||| || | | || |
Sbjct 528892 GCATGCACACCGACTTCGCCTGCATGCTG-CACGCA--CATCTCCG---CAA---CA-AG 528941
Query 125614 CCAGCGAT-GAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTT 125672
||| | | || ||| | | || | || || || || ||| || ||||||||
Sbjct 528942 CCATCACTCGACCTCGTCCACCAGATCATCACGGAAGCTGTCGAGATTGAGCAAGAGTTC 529001
Query 125673 CTAACCGAATCCCTACCGGTCAGCA-TGATTGGCATGAACTGCAAGCTAATGTGCGAGTA 125731
|| | || |||| || | ||| | | ||||||||| |||||| |||||| ||||
Sbjct 529002 CTCTCGGACGCCCTGCC-CTGCGCACTTCTCGGCATGAACGCCAAGCTCATGTGCCAGTA 529060
Query 125732 CATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCC---GCAAGATTTACAA 125788
||| |||||||| || ||||| ||||| || |||||| ||||| |||||
Sbjct 529061 CATCGAGTTTGTCGCTGATCGCCTACTCCTCG---CACTTGGCCACAGCAAGTACTACAA 529117
Query 125789 CGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTT 125848
||||| || ||||| || |||||| | ||| || || | || ||||| ||||| ||
Sbjct 529118 CGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGCCGGCAAGACGAACTTCTT 529177
Query 125849 CGAGAAG 125855
|||||||
Sbjct 529178 CGAGAAG 529184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741057050928320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |