Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 2e-18
>seq2
Length=2712501
Score = 107 bits (118), Expect = 2e-18
Identities = 154/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||| ||||||||||| || || ||||| || | ||| || ||||||| || | |
Sbjct 1333673 CGCAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTCCGGCCA 1333614
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||||| ||| || || | ||||| | | ||||| ||||| || ||||| || |||
Sbjct 1333613 TCCTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGGTCTGGTGGGATACCCTCCTTG 1333554
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || | ||| ||| | ||| ||||| | || || || | |||||||
Sbjct 1333553 TCCTGGATCTTCGACTTCACGTTGTCGATCGTGTCGGATGATTCTACCTCGAGCGTGATG 1333494
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| || || || ||||| || || ||||| |||||||
Sbjct 1333493 GTCTTGCCTGTGAGAGTCTTGACGAAGATTTGCATGC 1333457
Score = 104 bits (114), Expect = 2e-17
Identities = 164/235 (70%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||||| ||||| | || || | ||||||||||| || || ||||| || | ||| |
Sbjct 1305861 TTTACTGCCCTCCACGCAGACGTAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGT 1305802
Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892
||||||||| || || ||||||| ||| || || | ||||| | | ||||| |
Sbjct 1305801 AATCGCTCAAGGTCCTGCCGTCCTCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGT 1305742
Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952
|||| || ||||| || || || | ||| || | ||| ||| | ||| ||||| |
Sbjct 1305741 CTGGTGGGATACCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATG 1305682
Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || | ||||||||| || || || ||||| || || || || |||||
Sbjct 1305681 ATTCCACCTCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATTTGCAT 1305627
Score = 104 bits (114), Expect = 2e-17
Identities = 164/235 (70%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||||| ||||| | || || | ||||||||||| || || ||||| || | ||| |
Sbjct 1361988 TTTACTGCCCTCCACGCAGACGTAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGT 1361929
Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892
||||||||| || || ||||||| ||| || || | ||||| | | ||||| |
Sbjct 1361928 AATCGCTCAAGGTCCTGCCGTCCTCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGT 1361869
Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952
|||| || ||||| || || || | ||| || | ||| ||| | ||| ||||| |
Sbjct 1361868 CTGGTGGGATACCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATG 1361809
Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || | ||||||||| || || || ||||| || || || || |||||
Sbjct 1361808 ATTCCACCTCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATTTGCAT 1361754
Score = 104 bits (114), Expect = 2e-17
Identities = 164/235 (70%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||||| ||||| | || || | ||||||||||| || || ||||| || | ||| |
Sbjct 1459513 TTTACTGCCCTCCACGCAGACGTAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGT 1459454
Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892
||||||||| || || ||||||| ||| || || | ||||| | | ||||| |
Sbjct 1459453 AATCGCTCAAGGTCCTGCCGTCCTCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGT 1459394
Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952
|||| || ||||| || || || | ||| || | ||| ||| | ||| ||||| |
Sbjct 1459393 CTGGTGGGATACCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATG 1459334
Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || | ||||||||| || || || ||||| || || || || |||||
Sbjct 1459333 ATTCCACCTCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATTTGCAT 1459279
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870
||||| ||||| || | ||| || ||| | |||| | ||||| || || || |||
Sbjct 1333427 GTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGTTGCTTGCCG 1333368
Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930
| || || | | ||||| ||||||||||| || || ||||| | || || | ||||
Sbjct 1333367 GCGAAAATGAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTG 1333308
Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990
||| | ||| ||||| | | || || || | |||||||| || ||||| || ||
Sbjct 1333307 ACGTTGTCGATGGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTC 1333248
Query 94991 TTCACAAAGATCTGCAT 95007
|| || |||||||||||
Sbjct 1333247 TTGACGAAGATCTGCAT 1333231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448289899955520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |