Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1 149 8e-31
>seq1
Length=3303888
Score = 149 bits (164), Expect = 8e-31
Identities = 373/564 (66%), Gaps = 6/564 (1%)
Strand=Plus/Minus
Query 33297 CATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAA 33356
|| || ||| ||||| ||| ||||| |||||||| | ||| || |||||||| ||
Sbjct 494553 CAGCATACAGGCGAAGTCGGTGTGCATGCCCTCGTCACGGGAAATGAGCTCGTTGGAGAA 494494
Query 33357 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGA 33416
||||| |||||||| || || ||||| || ||||| || || | ||||| || |||||
Sbjct 494493 GGTGAGGCCGGGCATCAGCCCGCGCTTCTTGAGCCAGAAGATAGCGGCGAACGAACCAGA 494434
Query 33417 AAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTC-TCTCTCCATAACCG--GCGCT 33473
||||| || || || || || ||||||||||| || | | | | || |||
Sbjct 494433 GAAGAAAATGCCCTCGACAGCTGCAAAGGCAATGAGACGGCAGCCGAAGGTCGATGCGTC 494374
Query 33474 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 33533
||| ||||||||| | ||||| | ||||||||| | || || || | || ||
Sbjct 494373 GTCGCTGATCCACTTTAGTGCCCAGTTGGCCTTCTTGCGGATGCACGGGATGTTGTCGAT 494314
Query 33534 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 33593
||| |||||||| || | || | || | | || || ||||| | ||
Sbjct 494313 GGCGTTAAAGAGGTATGTGCGTTGGCGAGGTTCGCTGATGTAGGTGTCGATGAGTAGTGA 494254
Query 33594 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 33653
|| | || || || || || || || ||||| || |||||||| || | ||||||
Sbjct 494253 GTAGGTCTCGGAGTGGATATTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTC 494194
Query 33654 GGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACT 33713
| || || || || || ||||| || ||| || || || || || |||||
Sbjct 494193 AGGGATTTGCACCTCGCCACTGAATCGCTCGACCAGGTTCTCGTTGACGATGCCGTCTGA 494134
Query 33714 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTT 33770
|| || || || || | |||||| || || || ||||| | | | ||
Sbjct 494133 TGCGGCGAAGAAGGCAAGCACATGTGAAATGAAGAATCGCTCGTCATCATTGAGACGCTT 494074
Query 33771 ATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTC 33830
||||| || | | |||||| || | ||| | || || ||||||| |||||||||||
Sbjct 494073 GTTCCAGTCGTGCAGATCTTTCGACAGATCAATCTCCTCTGCTGTCCAGAATGATGCCTC 494014
Query 33831 TGCCTTTTTATACATGTTCCAGAT 33854
|||||| || ||||| | ||| ||
Sbjct 494013 TGCCTTCTTGTACATCTGCCATAT 493990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622945393453120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |