Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045. 2_202017-04-03] 232 sequences; 44,765,267 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 1e-13 >seq2 Length=2712501 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || || || | ||||| || | || ||| |||| || ||| || Sbjct 1333230 AATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTC 1333289 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||||||| | ||||| ||||| ||||| || ||||| ||||| || || Sbjct 1333290 CGACACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCA 1333349 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | || |||| || ||||||||||||||| || | | | | | ||| || || Sbjct 1333350 GCAGCGCCTCATTTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTTTCCGACTACAA 1333409 Query 24170 CATTCAAAAAGAATCTAC 24187 ||| || || || ||||| Sbjct 1333410 CATCCAGAAGGAGTCTAC 1333427 Score = 86.0 bits (94), Expect = 5e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 || || ||||| || || || || | || ||| | || || ||| | |||||||||| Sbjct 1305180 TTCGTCAAAACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATC 1305239 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | ||||| ||||| ||||| || ||||| ||||| || || ||| | || Sbjct 1305240 GACAATGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCTTG 1305299 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | || ||||||||| ||||| |||| | | | | || ||| || ||||| || || Sbjct 1305300 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAG 1305359 Query 24180 GAATCTACAATTCAT 24194 || || || ||||| Sbjct 1305360 GAGTCCACCCTTCAT 1305374 Score = 86.0 bits (94), Expect = 5e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 || ||||| || || || || || | || ||| | || || ||| | |||||||||| Sbjct 1333012 TTCGTAAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATC 1333071 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | ||||| ||||| ||||| || ||||| ||||| || || ||| | || Sbjct 1333072 GACAATGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCTTG 1333131 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | || ||||||||| ||||| |||| | | | | || ||| || ||||| || || Sbjct 1333132 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAG 1333191 Query 24180 GAATCTACAATTCAT 24194 || || || ||||| Sbjct 1333192 GAGTCCACCCTTCAT 1333206 Score = 86.0 bits (94), Expect = 5e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 || || ||||| || || || || | || ||| | || || ||| | |||||||||| Sbjct 1361307 TTCGTCAAAACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATC 1361366 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | ||||| ||||| ||||| || ||||| ||||| || || ||| | || Sbjct 1361367 GACAATGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCTTG 1361426 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | || ||||||||| ||||| |||| | | | | || ||| || ||||| || || Sbjct 1361427 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAG 1361486 Query 24180 GAATCTACAATTCAT 24194 || || || ||||| Sbjct 1361487 GAGTCCACCCTTCAT 1361501 Score = 86.0 bits (94), Expect = 5e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 || || ||||| || || || || | || ||| | || || ||| | |||||||||| Sbjct 1458832 TTCGTCAAAACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATC 1458891 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | ||||| ||||| ||||| || ||||| ||||| || || ||| | || Sbjct 1458892 GACAATGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCTTG 1458951 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | || ||||||||| ||||| |||| | | | | || ||| || ||||| || || Sbjct 1458952 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAG 1459011 Query 24180 GAATCTACAATTCAT 24194 || || || ||||| Sbjct 1459012 GAGTCCACCCTTCAT 1459026 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || || | || ||| |||| || ||| | | Sbjct 1305399 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 1305458 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| || ||||| ||||| || ||| Sbjct 1305459 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAA 1305518 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA 24145 ||| | || |||| || ||||||||||||||| || Sbjct 1305519 CAGCGCCTCATTTTCGCCGGCAAGCAACTCGAGGA 1305553 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || || | || ||| |||| || ||| | | Sbjct 1361526 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 1361585 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| || ||||| ||||| || ||| Sbjct 1361586 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAA 1361645 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA 24145 ||| | || |||| || ||||||||||||||| || Sbjct 1361646 CAGCGCCTCATTTTCGCCGGCAAGCAACTCGAGGA 1361680 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || || | || ||| |||| || ||| | | Sbjct 1459051 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 1459110 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| || ||||| ||||| || ||| Sbjct 1459111 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAA 1459170 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA 24145 ||| | || |||| || ||||||||||||||| || Sbjct 1459171 CAGCGCCTCATTTTCGCCGGCAAGCAACTCGAGGA 1459205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429934784355960