Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq2 136 3e-27
>seq2
Length=2712501
Score = 136 bits (150), Expect = 3e-27
Identities = 206/293 (70%), Gaps = 0/293 (0%)
Strand=Plus/Plus
Query 6192 GCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGA 6251
||||| | |||||||||||||| ||| ||||||| |||| || || || || |||
Sbjct 835690 GCGGATCCCTTCTACCGCTACAAGATGGAGCGCATCCAGTCCAAAGTAGAAGGCAAAGGA 835749
Query 6252 AACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCT 6311
||||| || || |||||||| |||||| || | ||||| | ||| | |||||
Sbjct 835750 AACGGCATCAAGACCGTCATCGTCAACCTGAGCAACGTCGCGCACCAGCTTGCGCGCCCG 835809
Query 6312 GCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCAC 6371
||| |||| || || || ||||| | |||||||||||| ||||| | | || | |
Sbjct 835810 CCCAACTACGTGATCAAGTACTTCGGCTTCGAACTTGGCGCGCAGACCAACATCGACCCC 835869
Query 6372 AAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTT 6431
|| |||| |||| ||| | ||||| | || | | ||| |||||||| ||
Sbjct 835870 AAGGACGACCGCTGGATCATCAACGGCGCTCACGAAGCCAGCAAACTGCAGGATCATCTG 835929
Query 6432 GACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGAC 6484
||||||||||| |||||| ||||| ||| ||| ||| | || || |||||
Sbjct 835930 GACGGCTTTATCGCCAAGTTCGTGCTCTGTAAGGACTGCAAGAATCCCGAGAC 835982
Score = 131 bits (144), Expect = 1e-25
Identities = 207/294 (70%), Gaps = 2/294 (1%)
Strand=Plus/Plus
Query 6192 GCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGA 6251
||||| | |||||||| ||||| ||| ||||||| |||| || || ||||| |||
Sbjct 933319 GCGGATCCCTTCTACCGGTACAAGATGGAGCGCATCCAGTCCAAAGTAGAAGGTAAAGGA 933378
Query 6252 AACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCT 6311
||||| || || |||||||| |||||| | | ||||| | ||| | |||||
Sbjct 933379 AACGGCATCAAGACCGTCATCGTCAACCTAAGCAATGTCGCGCACCAGCTTGCGCGCCCG 933438
Query 6312 GCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCAC 6371
||| |||| || || || ||||| | |||||||||||| ||||| | | || | |
Sbjct 933439 CCCAACTACGTGATCAAGTACTTCGGCTTCGAACTTGGCGCGCAGACCAACATCGACCCC 933498
Query 6372 AAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTT 6431
|| |||| |||| ||| | ||||| | || | | ||| ||||||||| ||
Sbjct 933499 AAGGACGACCGCTGGATCATCAACGGCGCTCACGAAGCCAGCAAACTGCAGGACCATCTG 933558
Query 6432 GACGGCTTTATTCGC-AAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGAC 6484
|| ||||||| |||| ||||| ||||| ||| ||| ||| | || || |||||
Sbjct 933559 GATGGCTTTA-TCGCTAAGTTCGTGCTCTGTAAGGACTGCAAGAATCCCGAGAC 933611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946252936792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |