Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq2 96.9 3e-15
>seq2
Length=2712501
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244
|||||| || || || |||||||| ||| | ||| || || || ||||| || ||
Sbjct 1333428 CGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGTTGCTTGCC 1333369
Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304
||| | ||||| ||||| ||||| ||||||||||| || ||||| ||||| ||
Sbjct 1333368 GGCGAAAATGAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTT 1333309
Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364
| | || | |||||||| ||| || || || | ||| | || ||||| || || ||
Sbjct 1333308 GACGTTGTCGATGGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGGGT 1333249
Query 114365 TTTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 1333248 CTTGACGAAGATCTGCAT 1333231
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || || |||||||| ||| | ||| || || || ||||| || ||
Sbjct 1305595 GTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGTTGCTTGCCG 1305536
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| | ||||| ||||||||||| ||||||||||| || ||||| ||||| ||
Sbjct 1305535 GCGAAAATGAGGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTG 1305476
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||||| || || || || | ||| | || |||||||| || ||
Sbjct 1305475 ACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 1305416
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 1305415 TTGACGAAGATCTGCAT 1305399
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || || |||||||| ||| | ||| || || || ||||| || ||
Sbjct 1361722 GTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGTTGCTTGCCG 1361663
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| | ||||| ||||||||||| ||||||||||| || ||||| ||||| ||
Sbjct 1361662 GCGAAAATGAGGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTG 1361603
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||||| || || || || | ||| | || |||||||| || ||
Sbjct 1361602 ACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 1361543
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 1361542 TTGACGAAGATCTGCAT 1361526
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || || |||||||| ||| | ||| || || || ||||| || ||
Sbjct 1459247 GTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGTTGCTTGCCG 1459188
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| | ||||| ||||||||||| ||||||||||| || ||||| ||||| ||
Sbjct 1459187 GCGAAAATGAGGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTG 1459128
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||||| || || || || | ||| | || |||||||| || ||
Sbjct 1459127 ACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 1459068
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 1459067 TTGACGAAGATCTGCAT 1459051
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|| ||||| || | | || || || | ||| || || || || |||||||||||||||
Sbjct 1305853 CCTCCACGCAGACGTAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTC 1305794
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| || | || || | || || |||||| ||||||||||||| ||||| || ||
Sbjct 1305793 AAGGTCCTGCCGTCCTCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 1305734
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
|| || || || || |||||| || | | || | ||||| | ||||| ||
Sbjct 1305733 ATACCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACC 1305674
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | || | || ||||| || ||||| || || ||||| |||||
Sbjct 1305673 TCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATTTGCAT 1305627
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|| ||||| || | | || || || | ||| || || || || |||||||||||||||
Sbjct 1361980 CCTCCACGCAGACGTAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTC 1361921
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| || | || || | || || |||||| ||||||||||||| ||||| || ||
Sbjct 1361920 AAGGTCCTGCCGTCCTCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 1361861
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
|| || || || || |||||| || | | || | ||||| | ||||| ||
Sbjct 1361860 ATACCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACC 1361801
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | || | || ||||| || ||||| || || ||||| |||||
Sbjct 1361800 TCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATTTGCAT 1361754
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|| ||||| || | | || || || | ||| || || || || |||||||||||||||
Sbjct 1459505 CCTCCACGCAGACGTAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTC 1459446
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| || | || || | || || |||||| ||||||||||||| ||||| || ||
Sbjct 1459445 AAGGTCCTGCCGTCCTCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 1459386
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
|| || || || || |||||| || | | || | ||||| | ||||| ||
Sbjct 1459385 ATACCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACC 1459326
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | || | || ||||| || ||||| || || ||||| |||||
Sbjct 1459325 TCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATTTGCAT 1459279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420133212069984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |