Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq1 351 2e-91
>seq1
Length=3303888
Score = 351 bits (388), Expect = 2e-91
Identities = 587/843 (70%), Gaps = 12/843 (1%)
Strand=Plus/Plus
Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368
|||||||||||||| || || |||||| || ||||||||||| ||| | || ||
Sbjct 493999 ATGTACAAGAAGGCAGAGGCATCATTCTGGACAGCAGAGGAGATTGATCTGTCGAAAGAT 494058
Query 42369 ACGGCCGGCTGGGAGTCAC-TGTC--TGAGAACGAAAAGTTTTTCCTCAAAAACATACTG 42425
| || |||| | | | || ||| |||| || ||| | | | | ||
Sbjct 494059 CTGCACGACTGGAACAAGCGTCTCAATGATGACGAGCGATTCTTCATTTCACATGTGCTT 494118
Query 42426 GCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAA 42485
|||||||||||||| || |||||||| ||||| |||||||||| | | ||||
Sbjct 494119 GCCTTCTTCGCCGCATCAGACGGCATCGTCAACGAGAACCTGGTCGAGCGATTCAGTGGC 494178
Query 42486 GAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTG 42545
|||||||| | |||||| ||||||||||||||||||||||| || ||||| |
Sbjct 494179 GAGGTGCAAATCCCTGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGATGGAGAATATC 494238
Query 42546 CACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTAAC 42605
||||| ||| ||| | ||| || |||| |||||| || || | | || |
Sbjct 494239 CACTCCGAGACCTACTCACTACTCATCGACACCTACATCAGCGAACCTCGCCAACGCACA 494298
Query 42606 GGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTC 42665
|| || || ||||| || | || || |||||| |||||||| ||||||| ||
Sbjct 494299 TACCTCTTTAACGCCATCGACAACATCCCGTGCATCCGCAAGAAGGCCAACTGGGCACTA 494358
Query 42666 AACTGGATCGAGAGTCCCGACGCAACG---TTCGGCGAGAGGCTGGTAGCCTTTACCGCC 42722
|| |||||| || ||||||| || |||||| | || | |||||| | ||
Sbjct 494359 AAGTGGATC---AGCGACGACGCATCGACCTTCGGCTGCCGTCTCATTGCCTTTGCAGCT 494415
Query 42723 GTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTG 42782
||||||||||| |||||||| || | |||||| | ||||||||||||||| || | |
Sbjct 494416 GTCGAGGGCATTTTCTTCTCTGGTTCGTTCGCCGCTATCTTCTGGCTCAAGAAGCGCGGG 494475
Query 42783 TCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGG 42842
||||||||| ||||||||||| ||||| ||||| | | |||||||| |||| |
Sbjct 494476 CTGATGCCCGGCCTCACCTTCTCCAACGAGCTCATTTCCCGTGACGAGGGCATGCACACC 494535
Query 42843 GACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTC 42902
||||| ||||| | ||| | || || ||| | ||||||| || || | |||
Sbjct 494536 GACTTCGCCTGTATGCTG--CACG-CACATCTCCGCAACAAGCCATCACTCGACCTTGTC 494592
Query 42903 CGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCC 42962
| ||||||||||| || || ||||||||| | ||||||||| | | | || |||
Sbjct 494593 CACCAGATCATCACGGAAGCTGTCGAGATCGAGCAAGAGTTCCTCTCAGACGCCCTACCC 494652
Query 42963 GTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGAC 43022
| || ||||||||||| | | ||||||||| |||||||| ||| |||||| |||
Sbjct 494653 TGCGCACTTCTCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCTGAC 494712
Query 43023 CATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTT 43082
| || || | | || | | || ||||||| | | ||||||||||||
Sbjct 494713 CGCCTACTCCTCGCACTCGGCCACGGCAAGTACTACAACGCCACCAACCCCTTCGACTTC 494772
Query 43083 ATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTAC 43142
|||||||||||||| | | |||||||| ||||| |||||||||||||| | ||||||
Sbjct 494773 ATGGAGAACATCTCCCTCGCCGGCAAGACGAACTTCTTCGAGAAGCGCGTAGGTGACTAC 494832
Query 43143 CAG 43145
|||
Sbjct 494833 CAG 494835
Score = 349 bits (386), Expect = 7e-91
Identities = 590/845 (70%), Gaps = 16/845 (2%)
Strand=Plus/Plus
Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368
|||||||||||||| || || |||||| || |||||||| |||||| | |||||
Sbjct 528366 ATGTACAAGAAGGCAGAGGCATCATTCTGGACAGCAGAGGAGATCGACCTGTCGAAGGAT 528425
Query 42369 ACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCAAAAACATACT 42424
| || |||| | | |||| | || |||| || ||| | | | | ||
Sbjct 528426 CTGCACGACTGGAACAAGC-GTCTCAACGATGACGAGCGATTCTTCATTTCACATGTGCT 528484
Query 42425 GGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAA 42484
|||||||||||||| || |||||||| ||||| |||||||||| | | ||||
Sbjct 528485 TGCCTTCTTCGCCGCATCAGACGGCATTGTCAACGAGAACCTGGTCGAGCGCTTCAGTGG 528544
Query 42485 AGAGGTGCAG-TACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543
||||| || ||| || || ||||||||||||||||||||||| || ||||||
Sbjct 528545 TGAGGTCCAAATACCC-GACGCTCGCTGCTTCTACGGCTTCCAGATCATGATGGAGAACA 528603
Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTA 42603
| ||||| ||| ||| | ||| || |||| |||||| || || | | || |
Sbjct 528604 TCCACTCCGAGACCTACTCACTACTCATCGACACCTACATCAGTGAACCTCGCCAACGCA 528663
Query 42604 ACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGC 42663
|| ||||| ||||| || | || ||||||||| |||||||| | ||||| |
Sbjct 528664 CATACCTCTTCAACGCCATCGACAACATCCCCTGCATCCGCAAGAAGGCCAATTGGGCAC 528723
Query 42664 TCAACTGGATCGAGAGTCCCGACGCAACG---TTCGGCGAGAGGCTGGTAGCCTTTACCG 42720
|||| |||||| || ||| ||| || |||||| | || | || || | |
Sbjct 528724 TCAAGTGGATC---AGCGACGATGCATCGACCTTCGGCTGCCGTCTCATCGCTTTCGCAG 528780
Query 42721 CCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGG 42780
| |||||||| ||||||||||| ||| | |||||| ||||||||||||| ||| || |
Sbjct 528781 CTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCGCCATCTTCTGGCTGAAGAAGCGCG 528840
Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840
| |||||||| ||||||||||| ||||| |||||| | | |||||||| |||| |
Sbjct 528841 GGCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGCATGCACA 528900
Query 42841 GGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGG 42900
||||| |||||| | ||| | || || ||| | ||||||| || || | |
Sbjct 528901 CCGACTTCGCCTGCATGCTG--CACG-CACATCTCCGCAACAAGCCATCACTCGACCTCG 528957
Query 42901 TCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGC 42960
||| ||||||||||| || || ||||| ||| | ||||||||| || | | ||||
Sbjct 528958 TCCACCAGATCATCACGGAAGCTGTCGAGATTGAGCAAGAGTTCCTCTCGGACGCCCTGC 529017
Query 42961 CCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCG 43020
|| | || ||||||||||| | | ||||||||| |||||||| ||| ||||| |
Sbjct 529018 CCTGCGCACTTCTCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCTG 529077
Query 43021 ACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACT 43080
| | || || | | || | |||| ||||||| | | |||||||||||
Sbjct 529078 ATCGCCTACTCCTCGCACTTGGCCACAGCAAGTACTACAACGCCACCAACCCCTTCGACT 529137
Query 43081 TTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACT 43140
| |||||||||||||| | | |||||||| ||||| |||||||||||||| | ||||
Sbjct 529138 TCATGGAGAACATCTCCCTCGCCGGCAAGACGAACTTCTTCGAGAAGCGCGTAGGTGACT 529197
Query 43141 ACCAG 43145
|||||
Sbjct 529198 ACCAG 529202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944336461416320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |