Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq2 134 3e-26
seq1 89.7 1e-12
>seq2
Length=2712501
Score = 134 bits (148), Expect = 3e-26
Identities = 173/236 (73%), Gaps = 7/236 (3%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||||||||| | ||| ||||| || | ||| || || ||||| || ||||
Sbjct 1333461 CATG-CCACCGCGGAGGCGAAGGACGAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGT 1333403
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| || ||||| ||||| || | ||| || || ||||| || || ||||| || |
Sbjct 1333402 CGGAAAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAAATGAGGCGCTGCTGG---T 1333346
Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418
|||| || || || || |||||||| |||| || ||||| || || | ||| |
Sbjct 1333345 CTGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGGAGG 1333286
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
| || || ||||| ||||| ||||| || || || ||||||||||| |||||||||
Sbjct 1333285 ACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATT 1333230
Score = 132 bits (146), Expect = 1e-25
Identities = 168/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||||||||| | ||| ||||| || | || || || ||||| || |||||||
Sbjct 1305625 CCACCGCGGAGGCGAAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 1305566
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | ||| || || ||||| || || |||||||| |||||
Sbjct 1305565 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAAATGAGGCGCTGTTGG---TCTGGA 1305509
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || |||||||| |||| || || || || || | ||| || ||
Sbjct 1305508 GGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCA 1305449
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||| ||||| ||||| || ||||||||||| ||||||||
Sbjct 1305448 ACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1305399
Score = 132 bits (146), Expect = 1e-25
Identities = 144/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || |||||| | ||| || || || || || || || || ||||||
Sbjct 1333649 TCCTTCTGGATGTTGTAGTCGCTCAACGTCCGGCCATCCTCCAACTGCTTACCAGCGAAG 1333590
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| |||||||| || |||||| || || || |||||||| |||| ||||||||
Sbjct 1333589 ATAAGACGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTCGACTTCACGTTG 1333530
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| |||||||| ||||||||||| ||||| || || ||||||||||||
Sbjct 1333529 TCGATCGTGTCGGATGATTCTACCTCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACG 1333470
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 1333469 AAGATTTGCAT 1333459
Score = 132 bits (146), Expect = 1e-25
Identities = 168/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||||||||| | ||| ||||| || | || || || ||||| || |||||||
Sbjct 1361752 CCACCGCGGAGGCGAAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 1361693
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | ||| || || ||||| || || |||||||| |||||
Sbjct 1361692 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAAATGAGGCGCTGTTGG---TCTGGA 1361636
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || |||||||| |||| || || || || || | ||| || ||
Sbjct 1361635 GGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCA 1361576
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||| ||||| ||||| || ||||||||||| ||||||||
Sbjct 1361575 ACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1361526
Score = 132 bits (146), Expect = 1e-25
Identities = 168/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||||||||| | ||| ||||| || | || || || ||||| || |||||||
Sbjct 1459277 CCACCGCGGAGGCGAAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 1459218
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | ||| || || ||||| || || |||||||| |||||
Sbjct 1459217 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAAATGAGGCGCTGTTGG---TCTGGA 1459161
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || |||||||| |||| || || || || || | ||| || ||
Sbjct 1459160 GGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCA 1459101
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||| ||||| ||||| || ||||||||||| ||||||||
Sbjct 1459100 ACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1459051
Score = 114 bits (126), Expect = 3e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || || ||| | || | ||||| || || || || || ||||||
Sbjct 1305817 TCCTTCTGGATGTTGTAATCGCTCAAGGTCCTGCCGTCCTCCAACTGCTTCCCAGCGAAG 1305758
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| |||||||| || |||||| || || |||||||| || |||| ||||||||
Sbjct 1305757 ATGAGACGCTGCTGGTCTGGTGGGATACCCTCCTTATCCTGAATCTTCGACTTCACGTTG 1305698
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || ||||| || ||||||||||| ||||| || || ||||||||||||
Sbjct 1305697 TCGATCGTGTCTGATGATTCCACCTCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACG 1305638
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 1305637 AAAATTTGCAT 1305627
Score = 114 bits (126), Expect = 3e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || || ||| | || | ||||| || || || || || ||||||
Sbjct 1361944 TCCTTCTGGATGTTGTAATCGCTCAAGGTCCTGCCGTCCTCCAACTGCTTCCCAGCGAAG 1361885
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| |||||||| || |||||| || || |||||||| || |||| ||||||||
Sbjct 1361884 ATGAGACGCTGCTGGTCTGGTGGGATACCCTCCTTATCCTGAATCTTCGACTTCACGTTG 1361825
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || ||||| || ||||||||||| ||||| || || ||||||||||||
Sbjct 1361824 TCGATCGTGTCTGATGATTCCACCTCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACG 1361765
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 1361764 AAAATTTGCAT 1361754
Score = 114 bits (126), Expect = 3e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || || ||| | || | ||||| || || || || || ||||||
Sbjct 1459469 TCCTTCTGGATGTTGTAATCGCTCAAGGTCCTGCCGTCCTCCAACTGCTTCCCAGCGAAG 1459410
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| |||||||| || |||||| || || |||||||| || |||| ||||||||
Sbjct 1459409 ATGAGACGCTGCTGGTCTGGTGGGATACCCTCCTTATCCTGAATCTTCGACTTCACGTTG 1459350
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || ||||| || ||||||||||| ||||| || || ||||||||||||
Sbjct 1459349 TCGATCGTGTCTGATGATTCCACCTCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACG 1459290
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 1459289 AAAATTTGCAT 1459279
>seq1
Length=3303888
Score = 89.7 bits (98), Expect = 1e-12
Identities = 172/251 (69%), Gaps = 2/251 (1%)
Strand=Plus/Plus
Query 269091 CATAATGGAAGCAGTTACAAACGAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTAT 269150
||| | |||||| || | ||| |||||||| | | ||||| | || || | |
Sbjct 494601 CATCACGGAAGCTGTCGAGATCGAGCAAGAGTTCCTCTCAGACGCCCTACCCTGCGCACT 494660
Query 269151 GATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTT 269210
|||| ||||| ||| | |||||| || || ||||| ||||| ||||| || | |
Sbjct 494661 TCTCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCTGACCGCCTACT 494720
Query 269211 CACGGCACTCGGTTATGAGAAAGTG-TACAATTCGAAGAATCCCTTCGCCTTTATGGAAC 269269
| |||||||| | | | |||| ||||| | | || ||||||| ||| |||||
Sbjct 494721 CCTCGCACTCGGCCACG-GCAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGA 494779
Query 269270 TAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTC 269329
|| || |||| || ||||||||||||||||| ||||| || | ||||| ||
Sbjct 494780 ACATCTCCCTCGCCGGCAAGACGAACTTCTTCGAGAAGCGCGTAGGTGACTACCAGAAGG 494839
Query 269330 CTGGTGTAATG 269340
||||||| |||
Sbjct 494840 CTGGTGTCATG 494850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179650893477296
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