Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq1 141 2e-28
>seq1
Length=3303888
Score = 141 bits (156), Expect = 2e-28
Identities = 278/407 (68%), Gaps = 8/407 (2%)
Strand=Plus/Plus
Query 243351 CGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTT 243410
||| ||||| ||||| ||| || ||||||| |||||| | || |||||| |
Sbjct 494448 CGCTATCTTCTGGCTCAAGAAGCGCGGGCTGATGCCCGGCCTCACCTTCTCCAACGAGCT 494507
Query 243411 CATCAGTCGCGACGAGGGCCTTCACCAACAGTTCG---GTGAGCTTATGTATTCAAAGCT 243467
||| || ||||||||| | ||| | |||| || ||| | | || | ||
Sbjct 494508 CATTTCCCGTGACGAGGGCATGCACACCGACTTCGCCTGTATGCT---GCACGCACATCT 494564
Query 243468 CCAGAACAAGCTACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGA 243527
|| ||||||| | || |||| ||| | || |||||||| ||||| || || | |||
Sbjct 494565 CCGCAACAAGCCATCACTCGACCTTGTCCACCAGATCATCACGGAAGCTGTCGAGATCGA 494624
Query 243528 AAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCAT 243587
| || ||| | | ||||| | || ||| ||| | ||||||||| | | |||||
Sbjct 494625 GCAAGAGTTCCTCTCAGACGCCCTACCCTGCGCACTTCTCGGCATGAACGCCAAGCTCAT 494684
Query 243588 GGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGT 243647
| | ||||||||||| ||||| || |||||| | || |||| || || | | | ||||
Sbjct 494685 GTGCCAGTACATCGAGTTCGTCGCTGACCGCCTACTCCTCGCACTCGGCCACG-GCAAGT 494743
Query 243648 -GTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTA 243706
|||||| ||| |||||||| | ||| |||||| ||| || || || || || |
Sbjct 494744 ACTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGCCGGCAAGACGA 494803
Query 243707 ACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATG 243753
|||||||||| ||||| || |||| || || ||||||| |||
Sbjct 494804 ACTTCTTCGAGAAGCGCGTAGGTGACTACCAGAAGGCTGGTGTCATG 494850
Score = 140 bits (154), Expect = 7e-28
Identities = 277/405 (68%), Gaps = 4/405 (1%)
Strand=Plus/Plus
Query 243351 CGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTT 243410
||||||||| |||||| ||| || | ||||| |||||| | || |||||| |
Sbjct 528815 CGCCATCTTCTGGCTGAAGAAGCGCGGGCTCATGCCCGGCCTCACCTTCTCCAACGAGCT 528874
Query 243411 CATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTCCA 243470
|||| || ||||||||| | ||| | |||| | || | || | ||||
Sbjct 528875 CATCTCCCGTGACGAGGGCATGCACACCGACTTCGCCTGCATGCTGCACGCACATCTCCG 528934
Query 243471 GAACAAGCTACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAA 243530
||||||| | || |||| ||| | || |||||||| ||||| || || | || |
Sbjct 528935 CAACAAGCCATCACTCGACCTCGTCCACCAGATCATCACGGAAGCTGTCGAGATTGAGCA 528994
Query 243531 GGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGG 243590
|| ||| | | ||||| | || ||| ||| | ||||||||| | | |||||| |
Sbjct 528995 AGAGTTCCTCTCGGACGCCCTGCCCTGCGCACTTCTCGGCATGAACGCCAAGCTCATGTG 529054
Query 243591 ACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGT-GT 243649
||||||||||| || || || || ||| | || |||| ||||| | || |||| |
Sbjct 529055 CCAGTACATCGAGTTTGTCGCTGATCGCCTACTCCTCGCACTTGGCCA-CAGCAAGTACT 529113
Query 243650 ACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACT 243709
||||| ||| |||||||| | ||| |||||| ||| || || || || || ||||
Sbjct 529114 ACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGCCGGCAAGACGAACT 529173
Query 243710 TCTTCGAAAAGCGTGTCAGTGATTATCA-ACGCCCTGGTGTGATG 243753
||||||| ||||| || |||| || || | | || ||||| |||
Sbjct 529174 TCTTCGAGAAGCGCGTAGGTGACTACCAGAAGGCC-GGTGTCATG 529217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102876721689200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |