Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq1 167 3e-36
seq6 84.2 3e-11
>seq1
Length=3303888
Score = 167 bits (184), Expect = 3e-36
Identities = 445/665 (67%), Gaps = 20/665 (3%)
Strand=Plus/Minus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
|||||| || || ||||||||||||||||| ||||| ||| | | | ||| ||||||||
Sbjct 529199 GTAGTCACCTACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGCGAGGGAGATGTTCTCCAT 529140
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGA 125875
|| || || ||||| | | ||| | | ||| || || || || ||||||
Sbjct 529139 GAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGCTGTGGCC--AA---GTGCGAGGAGT 529085
Query 125876 ---CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 125932
||||| | ||| |||| ||||||| |||| || | |||||| |||| ||
Sbjct 529084 AGGCGATCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGAAGT 529025
Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992
|| || || |||||| ||| |||| | | |||||| || || |||||| | |||
Sbjct 529024 GCGCAGGGCAGGGCGTCCGAGAGGAACTCTTGCTCAATCTCGACAGCTTCCGTGATGATC 528965
Query 125993 GCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAA-GT-CTTGAAGAGTTCCACGGCAA 126050
||| | | ||| | || | ||||| | | || | || || | | ||| |
Sbjct 528964 TGGTGGACGAGGTCGAGTGATGGCTTGTTGCGGAGATGTGCGTGCAGCATGCA--GGCGA 528907
Query 126051 ACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCA 126110
| || ||| | |||||||||||||||||||| || || |||||| || || ||||
Sbjct 528906 AGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCA 528847
Query 126111 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCT 126170
|||| || |||||||||| |||||| || || ||||| || ||||||||||| ||||
Sbjct 528846 TGAGCCCGCGCTTCTTCAGCCAGAAGATGGCGGCGAATGAGCCAGAGAAGAAGATACCCT 528787
Query 126171 CCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAACCAC 126229
| ||| ||||| || | |||||| |||| | | || | | || | | ||||
Sbjct 528786 CGACAGCTGCGAAAGCGATGAGACG-GCAGCCGAAGGTCGATGCATCGTCGCTGATCCAC 528728
Query 126230 TTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGA-G 126288
|| | ||||| | ||||| || ||| || |||| | | | ||| || | |||| |
Sbjct 528727 TTGAGTGCCCAATTGGCCTTCTTGCGGATGCAGGGGATGTTGTCGATGGCGTTGAAGAGG 528668
Query 126289 TTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCC 126348
| | | || || || || ||||||| | || |||||| ||| || || |||
Sbjct 528667 TATGTGCGTTGGCGA-GGTTCACTGATGTAGGTGTCGATGAGTAGTGAGTAGGTCTCGGA 528609
Query 126349 GTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTA 126407
||||| | | ||| || | ||| | ||||||| |||| || ||| ||| || |
Sbjct 528608 GTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGAGCGTCGGGTATTTGGA 528550
Query 126408 CCTCA 126412
|||||
Sbjct 528549 CCTCA 528545
Score = 134 bits (148), Expect = 2e-26
Identities = 400/604 (66%), Gaps = 16/604 (3%)
Strand=Plus/Minus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
|||||| || || ||||||||||||||||| ||||| ||| | | | ||| ||||||||
Sbjct 494832 GTAGTCACCTACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGCGAGGGAGATGTTCTCCAT 494773
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGT--TGGCACCCCAATCTGTTTGAGGA 125873
|| || || ||||| | | ||| | | ||| |||| | | | | ||| |
Sbjct 494772 GAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGCCGTGGC---CGAGTGCGAG-GAGTA 494717
Query 125874 GACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGT 125933
| || || | |||| |||| ||||||| |||| || | |||||| |||| ||
Sbjct 494716 GGCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGAAGTG 494657
Query 125934 TACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGG 125993
|| || || ||||| ||| |||| | | ||| || || || |||||| | |||
Sbjct 494656 CGCAGGGTAGGGCGTCTGAGAGGAACTCTTGCTCGATCTCGACAGCTTCCGTGATGATCT 494597
Query 125994 CGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAA-GT-CTTGAAGAGTTCCACGGCAAA 126051
||| | ||| | || | ||||| | | || | || || | | ||| ||
Sbjct 494596 GGTGGACAAGGTCGAGTGATGGCTTGTTGCGGAGATGTGCGTGCAGCATACA--GGCGAA 494539
Query 126052 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCAT 126111
|| ||| | |||||||||||||| ||||| || || |||||| || || |||||
Sbjct 494538 GTCGGTGTGCATGCCCTCGTCACGGGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGGCAT 494479
Query 126112 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTC 126171
|| || |||||||| | |||||| || || || ||||| |||||||| || |||||
Sbjct 494478 CAGCCCGCGCTTCTTGAGCCAGAAGATAGCGGCGAACGAACCAGAGAAGAAAATGCCCTC 494419
Query 126172 CACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAACCACT 126230
||| || || |||| |||||| |||| | | || | | || | | |||||
Sbjct 494418 GACAGCTGCAAAGGCAATGAGACG-GCAGCCGAAGGTCGATGCGTCGTCGCTGATCCACT 494360
Query 126231 TCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGA-GT 126289
| | ||||| | ||||| || ||| ||||||| | | | ||| || | ||||| ||
Sbjct 494359 TTAGTGCCCAGTTGGCCTTCTTGCGGATGCACGGGATGTTGTCGATGGCGTTAAAGAGGT 494300
Query 126290 TCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCG 126349
| | || || || || ||||||| | || |||||| ||| || || ||| |
Sbjct 494299 ATGTGCGTTGGCGA-GGTTCGCTGATGTAGGTGTCGATGAGTAGTGAGTAGGTCTCGGAG 494241
Query 126350 TGGA 126353
||||
Sbjct 494240 TGGA 494237
>seq6
Length=1760288
Score = 84.2 bits (92), Expect = 3e-11
Identities = 214/323 (66%), Gaps = 6/323 (2%)
Strand=Plus/Minus
Query 172619 AGACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAG 172678
|||||||| || || |||||||||| ||| ||||||||| |||||||| |||| ||
Sbjct 172945 AGACCCTTGATATGCGAACCATCGTGATCTTGATCCGTCATGATCATAAGGTGACCGTAT 172886
Query 172679 CGAAGCTCGGAAACATCTTGATACTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGA 172738
|| || | ||||| || ||||| || || | |||| || ||||||||
Sbjct 172885 CGCAGACCTTTGGTGTCTTGGTAGTCCTTCTTATGCTGCAAGCCCATGAACTTCTTGATG 172826
Query 172739 TCATTGAACTCTTGGTTTGATGTGAGTTGCGCCACTGAAGCATCGCGGACATTTTTACAC 172798
| | || |||| ||| || || || | | || || || || |||||| |
Sbjct 172825 TTCTGGATCTCTGCGTTCTTTGAGATCTGGTCGATGGATGCGTCTCGTACATTTAGCATC 172766
Query 172799 TTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACT 172858
|| ||||| || || || || ||| || |||| || || || | | | || || |
Sbjct 172765 TTACCACGCAGGGGAAATACGCCGAAGAGATCTGGATTCACTACTGCACGGCCCGCCAGG 172706
Query 172859 GCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTT---TCCAGATTGT 172915
|| || | || || ||||| || |||| ||||| |||||||| |||| | |
Sbjct 172705 GCTAGCAACGATGCAGAGTCACCTTCAGTCAGAATGAGGGTACACTTCCATCCATCCT-T 172647
Query 172916 GCCGTCCCCGCCTTGTTCGCATC 172938
| || || ||||||||||||||
Sbjct 172646 G--GTGCCAGCCTTGTTCGCATC 172626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597351867674560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |