Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045. 2_202017-04-03] 232 sequences; 44,765,267 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2 116 4e-21 seq19 104 2e-17 >seq2 Length=2712501 Score = 116 bits (128), Expect = 4e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || ||||||| || || || || || |||||||| || | Sbjct 1305398 ACCACCACGCAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1305339 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| | || || |||||||||||||| | || | ||||||||||| ||||| Sbjct 1305338 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGAGG 1305279 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || ||||| || || ||| ||| || | || || | ||||| Sbjct 1305278 AATGCCCTCCTTGTCTTGGATCTTGCTCTTGACATTGTCGATGGTGTCGGAGCTCTCCAC 1305219 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434 || | || | ||||||||||||||| ||||| ||||| Sbjct 1305218 CTCAAGGGTGATGGTCTTGCCGGTCAAGGTTTTGACGAA 1305180 Score = 116 bits (128), Expect = 4e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || ||||||| || || || || || |||||||| || | Sbjct 1361525 ACCACCACGCAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1361466 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| | || || |||||||||||||| | || | ||||||||||| ||||| Sbjct 1361465 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGAGG 1361406 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || ||||| || || ||| ||| || | || || | ||||| Sbjct 1361405 AATGCCCTCCTTGTCTTGGATCTTGCTCTTGACATTGTCGATGGTGTCGGAGCTCTCCAC 1361346 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434 || | || | ||||||||||||||| ||||| ||||| Sbjct 1361345 CTCAAGGGTGATGGTCTTGCCGGTCAAGGTTTTGACGAA 1361307 Score = 116 bits (128), Expect = 4e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || ||||||| || || || || || |||||||| || | Sbjct 1459050 ACCACCACGCAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1458991 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| | || || |||||||||||||| | || | ||||||||||| ||||| Sbjct 1458990 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGAGG 1458931 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || ||||| || || ||| ||| || | || || | ||||| Sbjct 1458930 AATGCCCTCCTTGTCTTGGATCTTGCTCTTGACATTGTCGATGGTGTCGGAGCTCTCCAC 1458871 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434 || | || | ||||||||||||||| ||||| ||||| Sbjct 1458870 CTCAAGGGTGATGGTCTTGCCGGTCAAGGTTTTGACGAA 1458832 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| || || || || || |||||||| || | || |||||| | || Sbjct 1333214 AGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 1333155 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||||||||| | || | ||||||||||| |||||||| || || || ||| Sbjct 1333154 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCT 1333095 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || || | ||||| || | || | |||| Sbjct 1333094 TGGATCTTGCTCTTGACATTGTCGATGGTGTCGGAGCTCTCCACCTCAAGGGTGATGGTC 1333035 Query 64412 TTGCCGGTCAAAGTTTTTACGAA 64434 ||||||||||| || |||||||| Sbjct 1333034 TTGCCGGTCAAGGTCTTTACGAA 1333012 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | ||| || || || | ||||| || || || |||||||| || | Sbjct 1305626 ACCACCGCGGAGGCGAAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 1305567 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| |||| || || ||||||||||| ||||||| ||||| ||||| ||||| Sbjct 1305566 AAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAAATGAGGCGCTGTTGGTCTGGAGG 1305507 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| ||| || | || || | || || Sbjct 1305506 AATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 1305447 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||||||| | || || ||||| || ||||| Sbjct 1305446 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1305399 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||| | | ||| || || || | ||| || || || || |||||||| || | Sbjct 1333457 CCACCGCGGAGGCGAAGGACGAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGGAA 1333398 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| |||| || || ||||||||||| ||||||| ||||||||||| |||||| Sbjct 1333397 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCTGGAGGA 1333338 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||| || || | || || || || || Sbjct 1333337 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGGAGGACTCAACC 1333278 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || | || | ||||||||| || | || || ||||| || |||||| Sbjct 1333277 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATT 1333230 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | ||| || || || | ||||| || || || |||||||| || | Sbjct 1361753 ACCACCGCGGAGGCGAAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 1361694 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| |||| || || ||||||||||| ||||||| ||||| ||||| ||||| Sbjct 1361693 AAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAAATGAGGCGCTGTTGGTCTGGAGG 1361634 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| ||| || | || || | || || Sbjct 1361633 AATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 1361574 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||||||| | || || ||||| || ||||| Sbjct 1361573 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1361526 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | ||| || || || | ||||| || || || |||||||| || | Sbjct 1459278 ACCACCGCGGAGGCGAAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 1459219 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| |||| || || ||||||||||| ||||||| ||||| ||||| ||||| Sbjct 1459218 AAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAAATGAGGCGCTGTTGGTCTGGAGG 1459159 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| ||| || | || || | || || Sbjct 1459158 AATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 1459099 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||||||| | || || ||||| || ||||| Sbjct 1459098 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1459051 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| | || | |||||| || || || ||||||||||| | ||| | |||| Sbjct 1305838 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTCAAGGTCCTGCCGTCC 1305779 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | |||||| || || | ||||| ||||||||||| || || || || || || || Sbjct 1305778 TCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATACCCTCCTTATCC 1305719 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || | ||||| || | || | |||| Sbjct 1305718 TGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACCTCGAGCGTGATGGTC 1305659 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | ||| || |||||||||||||| Sbjct 1305658 TTGCCTGTGAGAGTCTTGACGAAAATTTGCAT 1305627 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| | || | |||||| || || || ||||||||||| | ||| | |||| Sbjct 1361965 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTCAAGGTCCTGCCGTCC 1361906 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | |||||| || || | ||||| ||||||||||| || || || || || || || Sbjct 1361905 TCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATACCCTCCTTATCC 1361846 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || | ||||| || | || | |||| Sbjct 1361845 TGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACCTCGAGCGTGATGGTC 1361786 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | ||| || |||||||||||||| Sbjct 1361785 TTGCCTGTGAGAGTCTTGACGAAAATTTGCAT 1361754 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| | || | |||||| || || || ||||||||||| | ||| | |||| Sbjct 1459490 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTCAAGGTCCTGCCGTCC 1459431 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | |||||| || || | ||||| ||||||||||| || || || || || || || Sbjct 1459430 TCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATACCCTCCTTATCC 1459371 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || | ||||| || | || | |||| Sbjct 1459370 TGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACCTCGAGCGTGATGGTC 1459311 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | ||| || |||||||||||||| Sbjct 1459310 TTGCCTGTGAGAGTCTTGACGAAAATTTGCAT 1459279 >seq19 Length=770886 Score = 104 bits (114), Expect = 2e-17 Identities = 284/433 (66%), Gaps = 8/433 (2%) Strand=Plus/Plus Query 153806 GTTAAACGACTGGCTCTGATCGATGAAAGCGCCGCGATCGGCCGCCATGTCAATCAAGTT 153865 ||| | ||||||| |||||||||||| ||||| |||||||| | ||| | || | ||| Sbjct 62645 GTTTAGCGACTGGGACTGATCGATGAAGGCGCCACGATCGGCTGACATCTGGATGATGTT 62704 Query 153866 TTTACTGCTCATTTCCCACACAGTTTTGTAGACGGCTTTAATGTCGTCGGGTATGCGATC 153925 ||| || ||||| ||||| || || | | || || |||||||| || Sbjct 62705 GCGCTGGCTGATCTCCCAGACAGTCTTATACAGCTCCTTGATCTCGTCGGGGATATTGGG 62764 Query 153926 AATTTTCTGCACACTGCCTCCGGCCGCTATAATGGAATTGCGCATGTGGTCGTCGTACAA 153985 ||| ||| | | ||| || | || || ||| || ||||| |||| | | Sbjct 62765 AATGCGCTGGATAGAGCCACCATCTGCGATGATGCGGTTCTTCATGTTGTCGCTCCAGAG 62824 Query 153986 ATTTA-GTCGACATAAATCTT---CAACCAAGTGCTGGTTAATTACTTGAAAATCGCCGG 154041 | ||||||| ||| || ||| | |||| | ||||| || ||||||| Sbjct 62825 GCCCATGTCGACAAGGTCCTTGAGCAGCCAGG----GGTTGACGACTTGGAACTCGCCGG 62880 Query 154042 CCAATACGCGGCGCACATACAAATTGCTGGTGAACGGCTCGAACGATTCGTTGTTGCCTA 154101 ||| || || || || | ||||||||| ||||||| || | || ||| || | Sbjct 62881 CCAGGACACGACGAGAGTAGATGTTGCTGGTGTACGGCTCAAAGCACTCATTGAACCCCA 62940 Query 154102 ATATTTGAGCTGTAGTTGCTGTGGGCATATACGCCACCAACAAAGAGTTTCGCAAACCGT 154161 || || | ||| |||||||||||||| ||| || | || |||||| || | || | Sbjct 62941 TGATCTGCGATGTGCTTGCTGTGGGCATAGGCGCGACGAGCAGAGAGTTGCGGACGCCAT 63000 Query 154162 GTTTTGCAATGCGCAATTTTAAATCTGCCCAATTCCACAAGTTGGTAGGTTGCACGTTCC 154221 | ||| || ||| || | || |||||| |||||||| || ||| ||| || Sbjct 63001 GCACTGCGATCCGCGCCTTGAGGGCTTCCCAATCCCACAAGTCAGTGGGTGTCACACCCC 63060 Query 154222 ACATGTCGTATTG 154234 ||||||||||||| Sbjct 63061 ACATGTCGTATTG 63073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499643351030080