Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq2 116 4e-21
seq19 104 2e-17
>seq2
Length=2712501
Score = 116 bits (128), Expect = 4e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | || || ||||||| || || || || || |||||||| || |
Sbjct 1305398 ACCACCACGCAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1305339
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| |||||| | || || |||||||||||||| | || | ||||||||||| |||||
Sbjct 1305338 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGAGG 1305279
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || ||||| || || ||| ||| || | || || | |||||
Sbjct 1305278 AATGCCCTCCTTGTCTTGGATCTTGCTCTTGACATTGTCGATGGTGTCGGAGCTCTCCAC 1305219
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434
|| | || | ||||||||||||||| ||||| |||||
Sbjct 1305218 CTCAAGGGTGATGGTCTTGCCGGTCAAGGTTTTGACGAA 1305180
Score = 116 bits (128), Expect = 4e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | || || ||||||| || || || || || |||||||| || |
Sbjct 1361525 ACCACCACGCAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1361466
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| |||||| | || || |||||||||||||| | || | ||||||||||| |||||
Sbjct 1361465 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGAGG 1361406
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || ||||| || || ||| ||| || | || || | |||||
Sbjct 1361405 AATGCCCTCCTTGTCTTGGATCTTGCTCTTGACATTGTCGATGGTGTCGGAGCTCTCCAC 1361346
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434
|| | || | ||||||||||||||| ||||| |||||
Sbjct 1361345 CTCAAGGGTGATGGTCTTGCCGGTCAAGGTTTTGACGAA 1361307
Score = 116 bits (128), Expect = 4e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | || || ||||||| || || || || || |||||||| || |
Sbjct 1459050 ACCACCACGCAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1458991
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| |||||| | || || |||||||||||||| | || | ||||||||||| |||||
Sbjct 1458990 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGAGG 1458931
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || ||||| || || ||| ||| || | || || | |||||
Sbjct 1458930 AATGCCCTCCTTGTCTTGGATCTTGCTCTTGACATTGTCGATGGTGTCGGAGCTCTCCAC 1458871
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434
|| | || | ||||||||||||||| ||||| |||||
Sbjct 1458870 CTCAAGGGTGATGGTCTTGCCGGTCAAGGTTTTGACGAA 1458832
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||||| || || || || || |||||||| || | || |||||| | ||
Sbjct 1333214 AGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 1333155
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||||||||| | || | ||||||||||| |||||||| || || || |||
Sbjct 1333154 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCT 1333095
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | || || | ||||| || | || | ||||
Sbjct 1333094 TGGATCTTGCTCTTGACATTGTCGATGGTGTCGGAGCTCTCCACCTCAAGGGTGATGGTC 1333035
Query 64412 TTGCCGGTCAAAGTTTTTACGAA 64434
||||||||||| || ||||||||
Sbjct 1333034 TTGCCGGTCAAGGTCTTTACGAA 1333012
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||| | | ||| || || || | ||||| || || || |||||||| || |
Sbjct 1305626 ACCACCGCGGAGGCGAAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 1305567
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| |||| || || ||||||||||| ||||||| ||||| ||||| |||||
Sbjct 1305566 AAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAAATGAGGCGCTGTTGGTCTGGAGG 1305507
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || || || || || ||| ||| || | || || | || ||
Sbjct 1305506 AATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 1305447
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||||||| | || || ||||| || |||||
Sbjct 1305446 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1305399
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| ||||| | | ||| || || || | ||| || || || || |||||||| || |
Sbjct 1333457 CCACCGCGGAGGCGAAGGACGAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGGAA 1333398
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||||| |||| || || ||||||||||| ||||||| ||||||||||| ||||||
Sbjct 1333397 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCTGGAGGA 1333338
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| || || || || || || || ||| || || | || || || || ||
Sbjct 1333337 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGGAGGACTCAACC 1333278
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|| | || | ||||||||| || | || || ||||| || ||||||
Sbjct 1333277 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATT 1333230
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||| | | ||| || || || | ||||| || || || |||||||| || |
Sbjct 1361753 ACCACCGCGGAGGCGAAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 1361694
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| |||| || || ||||||||||| ||||||| ||||| ||||| |||||
Sbjct 1361693 AAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAAATGAGGCGCTGTTGGTCTGGAGG 1361634
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || || || || || ||| ||| || | || || | || ||
Sbjct 1361633 AATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 1361574
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||||||| | || || ||||| || |||||
Sbjct 1361573 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1361526
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||| | | ||| || || || | ||||| || || || |||||||| || |
Sbjct 1459278 ACCACCGCGGAGGCGAAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 1459219
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| |||| || || ||||||||||| ||||||| ||||| ||||| |||||
Sbjct 1459218 AAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAAATGAGGCGCTGTTGGTCTGGAGG 1459159
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || || || || || ||| ||| || | || || | || ||
Sbjct 1459158 AATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 1459099
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||||||| | || || ||||| || |||||
Sbjct 1459098 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1459051
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | || | |||||| || || || ||||||||||| | ||| | ||||
Sbjct 1305838 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTCAAGGTCCTGCCGTCC 1305779
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| | |||||| || || | ||||| ||||||||||| || || || || || || ||
Sbjct 1305778 TCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATACCCTCCTTATCC 1305719
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | || || | ||||| || | || | ||||
Sbjct 1305718 TGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACCTCGAGCGTGATGGTC 1305659
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| || | ||| || ||||||||||||||
Sbjct 1305658 TTGCCTGTGAGAGTCTTGACGAAAATTTGCAT 1305627
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | || | |||||| || || || ||||||||||| | ||| | ||||
Sbjct 1361965 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTCAAGGTCCTGCCGTCC 1361906
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| | |||||| || || | ||||| ||||||||||| || || || || || || ||
Sbjct 1361905 TCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATACCCTCCTTATCC 1361846
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | || || | ||||| || | || | ||||
Sbjct 1361845 TGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACCTCGAGCGTGATGGTC 1361786
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| || | ||| || ||||||||||||||
Sbjct 1361785 TTGCCTGTGAGAGTCTTGACGAAAATTTGCAT 1361754
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | || | |||||| || || || ||||||||||| | ||| | ||||
Sbjct 1459490 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTCAAGGTCCTGCCGTCC 1459431
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| | |||||| || || | ||||| ||||||||||| || || || || || || ||
Sbjct 1459430 TCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATACCCTCCTTATCC 1459371
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | || || | ||||| || | || | ||||
Sbjct 1459370 TGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACCTCGAGCGTGATGGTC 1459311
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| || | ||| || ||||||||||||||
Sbjct 1459310 TTGCCTGTGAGAGTCTTGACGAAAATTTGCAT 1459279
>seq19
Length=770886
Score = 104 bits (114), Expect = 2e-17
Identities = 284/433 (66%), Gaps = 8/433 (2%)
Strand=Plus/Plus
Query 153806 GTTAAACGACTGGCTCTGATCGATGAAAGCGCCGCGATCGGCCGCCATGTCAATCAAGTT 153865
||| | ||||||| |||||||||||| ||||| |||||||| | ||| | || | |||
Sbjct 62645 GTTTAGCGACTGGGACTGATCGATGAAGGCGCCACGATCGGCTGACATCTGGATGATGTT 62704
Query 153866 TTTACTGCTCATTTCCCACACAGTTTTGTAGACGGCTTTAATGTCGTCGGGTATGCGATC 153925
||| || ||||| ||||| || || | | || || |||||||| ||
Sbjct 62705 GCGCTGGCTGATCTCCCAGACAGTCTTATACAGCTCCTTGATCTCGTCGGGGATATTGGG 62764
Query 153926 AATTTTCTGCACACTGCCTCCGGCCGCTATAATGGAATTGCGCATGTGGTCGTCGTACAA 153985
||| ||| | | ||| || | || || ||| || ||||| |||| | |
Sbjct 62765 AATGCGCTGGATAGAGCCACCATCTGCGATGATGCGGTTCTTCATGTTGTCGCTCCAGAG 62824
Query 153986 ATTTA-GTCGACATAAATCTT---CAACCAAGTGCTGGTTAATTACTTGAAAATCGCCGG 154041
| ||||||| ||| || ||| | |||| | ||||| || |||||||
Sbjct 62825 GCCCATGTCGACAAGGTCCTTGAGCAGCCAGG----GGTTGACGACTTGGAACTCGCCGG 62880
Query 154042 CCAATACGCGGCGCACATACAAATTGCTGGTGAACGGCTCGAACGATTCGTTGTTGCCTA 154101
||| || || || || | ||||||||| ||||||| || | || ||| || |
Sbjct 62881 CCAGGACACGACGAGAGTAGATGTTGCTGGTGTACGGCTCAAAGCACTCATTGAACCCCA 62940
Query 154102 ATATTTGAGCTGTAGTTGCTGTGGGCATATACGCCACCAACAAAGAGTTTCGCAAACCGT 154161
|| || | ||| |||||||||||||| ||| || | || |||||| || | || |
Sbjct 62941 TGATCTGCGATGTGCTTGCTGTGGGCATAGGCGCGACGAGCAGAGAGTTGCGGACGCCAT 63000
Query 154162 GTTTTGCAATGCGCAATTTTAAATCTGCCCAATTCCACAAGTTGGTAGGTTGCACGTTCC 154221
| ||| || ||| || | || |||||| |||||||| || ||| ||| ||
Sbjct 63001 GCACTGCGATCCGCGCCTTGAGGGCTTCCCAATCCCACAAGTCAGTGGGTGTCACACCCC 63060
Query 154222 ACATGTCGTATTG 154234
|||||||||||||
Sbjct 63061 ACATGTCGTATTG 63073
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499643351030080
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