Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq2 82.4 5e-11
>seq2
Length=2712501
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|| || |||| | || || || || || || || || || || ||||||||||||||
Sbjct 1305853 CCTCCACGCAGACGTAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTC 1305794
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | || |||| || || || || |||||| | || | |||||| ||||| |||
Sbjct 1305793 AAGGTCCTGCCGTCCTCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 1305734
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| || ||||| || ||| || || || | || || || || ||| ||
Sbjct 1305733 ATACCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACC 1305674
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| | || ||||| || ||||| ||||| || || ||||||||||||
Sbjct 1305673 TCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATTTGCATA 1305626
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|| || |||| | || || || || || || || || || || ||||||||||||||
Sbjct 1361980 CCTCCACGCAGACGTAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTC 1361921
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | || |||| || || || || |||||| | || | |||||| ||||| |||
Sbjct 1361920 AAGGTCCTGCCGTCCTCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 1361861
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| || ||||| || ||| || || || | || || || || ||| ||
Sbjct 1361860 ATACCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACC 1361801
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| | || ||||| || ||||| ||||| || || ||||||||||||
Sbjct 1361800 TCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATTTGCATA 1361753
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|| || |||| | || || || || || || || || || || ||||||||||||||
Sbjct 1459505 CCTCCACGCAGACGTAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTC 1459446
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | || |||| || || || || |||||| | || | |||||| ||||| |||
Sbjct 1459445 AAGGTCCTGCCGTCCTCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 1459386
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| || ||||| || ||| || || || | || || || || ||| ||
Sbjct 1459385 ATACCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACC 1459326
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| | || ||||| || ||||| ||||| || || ||||||||||||
Sbjct 1459325 TCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATTTGCATA 1459278
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357390989474120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |