Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq1 172 7e-38
seq135 96.9 4e-15
seq19 91.5 2e-13
>seq1
Length=3303888
Score = 172 bits (190), Expect = 7e-38
Identities = 446/665 (67%), Gaps = 20/665 (3%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| || || ||||||||||||||||| ||||| || ||||| ||| ||||||||
Sbjct 529199 GTAGTCACCTACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGCGAGGGAGATGTTCTCCAT 529140
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGA 127348
|| || || ||||| | | ||| | | ||| || || || || ||||||
Sbjct 529139 GAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGCTGTGGCC--AA---GTGCGAGGAGT 529085
Query 127349 ---CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 127405
||||| | ||| |||| ||||||| |||| || | |||||| |||| ||
Sbjct 529084 AGGCGATCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGAAGT 529025
Query 127406 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATG 127465
|| || || |||||| ||| |||| | | |||||| || ||||||||| | |||
Sbjct 529024 GCGCAGGGCAGGGCGTCCGAGAGGAACTCTTGCTCAATCTCGACAGCTTCCGTGATGATC 528965
Query 127466 GCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAA-GT-CTTGAAGAGTTCCACAGCAA 127523
||| | ||| | || | ||||| | | || | || || | | || |
Sbjct 528964 TGGTGGACGAGGTCGAGTGATGGCTTGTTGCGGAGATGTGCGTGCAGCATGCAG--GCGA 528907
Query 127524 ACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCA 127583
| || ||| | |||||||||||||||||||| || || |||||| || || ||||
Sbjct 528906 AGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCA 528847
Query 127584 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCT 127643
|||| || |||||||||| |||||| || || |||||||||||||||||||| ||||
Sbjct 528846 TGAGCCCGCGCTTCTTCAGCCAGAAGATGGCGGCGAATGAGCCAGAGAAGAAGATACCCT 528787
Query 127644 CCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATC-AAACCAC 127702
| ||| ||||| || | ||||| | | |||| || | | || | | ||||
Sbjct 528786 CGACAGCTGCGAAAGCGATGAGACGGCAGCCGAAGG-TCGATGCATCGTCGCTGATCCAC 528728
Query 127703 TTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGA-G 127761
|| | ||||| | ||||| || ||| || |||| | | | ||| || | |||| |
Sbjct 528727 TTGAGTGCCCAATTGGCCTTCTTGCGGATGCAGGGGATGTTGTCGATGGCGTTGAAGAGG 528668
Query 127762 TTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCC 127821
| | | || || || || ||||||| | || |||||| ||| || || |||
Sbjct 528667 TATGTGCGTTGGCGA-GGTTCACTGATGTAGGTGTCGATGAGTAGTGAGTAGGTCTCGGA 528609
Query 127822 GTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTA 127880
||||| | | ||| || | ||| | ||||||| |||| || ||| ||| || |
Sbjct 528608 GTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGAGCGTCGGGTATTTGGA 528550
Query 127881 CCTCA 127885
|||||
Sbjct 528549 CCTCA 528545
Score = 138 bits (152), Expect = 1e-27
Identities = 402/605 (66%), Gaps = 18/605 (3%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| || || ||||||||||||||||| ||||| || ||||| ||| ||||||||
Sbjct 494832 GTAGTCACCTACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGCGAGGGAGATGTTCTCCAT 494773
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGT--TGGCACCCCAATCTGTTTGAGGA 127346
|| || || ||||| | | ||| | | ||| |||| | | | | ||| |
Sbjct 494772 GAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGCCGTGGC---CGAGTGCGAG-GAGTA 494717
Query 127347 GACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGT 127406
| || || | |||| |||| ||||||| |||| || | |||||| |||| ||
Sbjct 494716 GGCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGAAGTG 494657
Query 127407 TACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGG 127466
|| || || ||||| ||| |||| | | ||| || || ||||||||| | |||
Sbjct 494656 CGCAGGGTAGGGCGTCTGAGAGGAACTCTTGCTCGATCTCGACAGCTTCCGTGATGATCT 494597
Query 127467 CGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAA-GT-CTTGAAGAGTTCCACAG-CAA 127523
||| | | ||| | || | ||||| | | || | || || | |||| | |
Sbjct 494596 GGTGGACAAGGTCGAGTGATGGCTTGTTGCGGAGATGTGCGTGCAGCAT---ACAGGCGA 494540
Query 127524 ACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCA 127583
| || ||| | |||||||||||||| ||||| || || |||||| || || ||||
Sbjct 494539 AGTCGGTGTGCATGCCCTCGTCACGGGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGGCA 494480
Query 127584 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCT 127643
| || || |||||||| | |||||| || || || || ||||||||||| || ||||
Sbjct 494479 TCAGCCCGCGCTTCTTGAGCCAGAAGATAGCGGCGAACGAACCAGAGAAGAAAATGCCCT 494420
Query 127644 CCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATC-AAACCAC 127702
| ||| || || |||| ||||| | | |||| || | | || | | ||||
Sbjct 494419 CGACAGCTGCAAAGGCAATGAGACGGCAGCCGAAGG-TCGATGCGTCGTCGCTGATCCAC 494361
Query 127703 TTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGA-G 127761
|| | ||||| | ||||| || ||| || |||| | | | ||| || | ||||| |
Sbjct 494360 TTTAGTGCCCAGTTGGCCTTCTTGCGGATGCACGGGATGTTGTCGATGGCGTTAAAGAGG 494301
Query 127762 TTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCC 127821
| | | || || || || ||||||| | || |||||| ||| || || |||
Sbjct 494300 TATGTGCGTTGGCGA-GGTTCGCTGATGTAGGTGTCGATGAGTAGTGAGTAGGTCTCGGA 494242
Query 127822 GTGGA 127826
|||||
Sbjct 494241 GTGGA 494237
>seq135
Length=6449
Score = 96.9 bits (106), Expect = 4e-15
Identities = 306/456 (67%), Gaps = 25/456 (5%)
Strand=Plus/Minus
Query 12705 TCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCG 12764
|| || ||||| || || | |||||| | ||| || | ||| || ||||| | |||
Sbjct 2469 TCGAAACGACCCGGTCGCATGAGGGCCTTGTCTAGAACATCTGGTCGATTCGTGCCAGCG 2410
Query 12765 ATGACAACGA--TGC-CCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAGTTGATTG 12821
| ||| || | || |||| ||| |||||| ||||||||||| | || ||||||
Sbjct 2409 AGGACGACAACTTGATCCGTAGTGTT---GAAGCCGTCCATCTCAGTGAGGATCTGATTG 2353
Query 12822 ATGGTTTGTTCACGTTCATCATT--CGCGGGCATACCACCCGCACTGCG-TTGC-TTACC 12877
| ||| || || || || || ||| | || || || ||| |||| || ||
Sbjct 2352 AGGGTGCTCTCGCGCTCGTCGTTACCGCCACCGAACGACT-GCTTTGCTCTTGCCTTGCC 2294
Query 12878 GACGGCGTCAATTTCGTCAATGAAAACGATACACGGT-TGATTTTCACGGGCAACTTCAA 12936
|| |||||||| ||||||||||| | ||| |||||| | ||| || ||| | |
Sbjct 2293 GATAGCGTCAATCTCGTCAATGAAGATGATGCACGGTGTCGACTTC-CGTGCATTGGCGA 2235
Query 12937 AGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGG 12996
| | ||||||||| | | |||||||||||||||||||||||| || | | | |
Sbjct 2234 ACAGATCTCGCACACGTGAAGGACCGACACCCACAAACATCTCCACGAACTCAGACCCTG 2175
Query 12997 A-ACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTC 13055
| || | || |||||| ||| || || || || | || ||||| || |||||
Sbjct 2174 ACACGCT-GAAGAAGGGCACGCCAGACTCGCCAGCAGTCGCCTTCGCGAGCAGCGTCTTA 2116
Query 13056 CCCGTCCCTGG-TTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACCA--CTTC-- 13110
|| || || || || | | || | ||||| || |||||| | |||||| ||||
Sbjct 2115 CCAGTACCGGGCGGACCGCTCAAG-ATCGCACCTCGAGGGATCTTTGCACCAAGCTTCGT 2057
Query 13111 CAAAGTAGCGCTCGGGTTGTTTAAGAAAGTCCACGA 13146
||| | |||||||||||| || || | |||||
Sbjct 2056 GAAAAT----CTCGGGTTGTTTGAGGAACTGCACGA 2025
>seq19
Length=770886
Score = 91.5 bits (100), Expect = 2e-13
Identities = 253/385 (66%), Gaps = 10/385 (3%)
Strand=Plus/Plus
Query 115660 TGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG 115719
||||| |||||||||||| || ||||| || | ||| | || | | | ||
Sbjct 62655 TGGGACTGATCGATGAAGGCGCCACGATCGGCTGACATCTGGATGATGTTGCGCTGGCTG 62714
Query 115720 ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGG 115779
|| ||||| ||||| | || || | ||| || || || ||||||| || |||
Sbjct 62715 ATCTCCCAGACAGTCTTATACAGCTCCTTGATCTCGTCGGGGATATTGGGAATGCGCTGG 62774
Query 115780 ATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTC 115839
||||||||||| | || ||| | | |||||| | | |||||| || || |
Sbjct 62775 ATAGAGCCACCATCTGCGATGATGCGGTTCTTCATGTTGTCGCTCCAGAGGCCCATGTCG 62834
Query 115840 TTGAGATCCTCCA----CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCG 115895
|| |||| | | ||| | ||||| || ||||| || || ||| ||
Sbjct 62835 ACAAGGTCCTTGAGCAGCCAGGGG----TTGACGACTTGGAACTCGCCGGCCAGGACACG 62890
Query 115896 TCTCAGA-TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGG 115954
| ||| ||||||||| | ||||| |||||||||||||||||| |||| ||| || |
Sbjct 62891 ACG-AGAGTAGATGTTGCTGGTGTACGGCTCAAAGCACTCATTGAACCCCATGATCTGCG 62949
Query 115955 CTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAA 116014
|||| ||||||||||| || || | ||| || |||||||| || | | |
Sbjct 62950 ATGTGCTTGCTGTGGGCATAGGCGCGACGAGCAGAGAGTTGCGGACGCCATGCACTGCGA 63009
Query 116015 TGCGTTCCTTGAGGGCGTCCCAGTC 116039
| || |||||||||| ||||| ||
Sbjct 63010 TCCGCGCCTTGAGGGCTTCCCAATC 63034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613505420829120
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