Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045. 2_202017-04-03] 232 sequences; 44,765,267 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq19 104 4e-17 >seq19 Length=770886 Score = 104 bits (114), Expect = 4e-17 Identities = 369/565 (65%), Gaps = 9/565 (2%) Strand=Plus/Plus Query 203838 TCTTG-TCCACCGTGAACTGAATGG-CGTTCACGGCAGGCCTGCTTCTCAGATAGTACAT 203895 ||||| || || |||||||| |||| || | | ||| | | || | | || |||||||| Sbjct 62508 TCTTGATCGACAGTGAACTGGATGGGCGCTGA-GGCGGCCATGGTGCGGAGGTAGTACAT 62566 Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955 ||| ||||| || || |||| ||| | ||||||||| | | |||| || | Sbjct 62567 GCCAGTCTTAAGTCCTAGACGCCAGCCGGTGAAGTGCATGGACGTGATCTTGCCCATCGT 62626 Query 203956 GGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTG 204014 || || |||||| ||||| || |||||| || |||||| |||||||| ||||| | Sbjct 62627 CGGCTCCTTCATGTGGATGTTTAGCGACTGGGACTGATCGATG-AAGGCGCCACGATCGG 62685 Query 204015 CGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGG 204074 | | ||| | ||| ||| | ||| |||||||| || ||||| ||| || || Sbjct 62686 CTGACATCTGGATGATGTTGCGCTGGCTGATCTCCCAGACAGTCTTATACAGCTCCTTGA 62745 Query 204075 TGTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133 | | | || | || | | | || ||| ||||| || || || | | || Sbjct 62746 TCTCGTCGGGGATAT-TGGGAATGCGCTGGATAGAGCCACCATCTGCGATGATGCGGTTC 62804 Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | | || | ||| | ||||| || || ||| | ||| |||||||| | Sbjct 62805 TTCATGTTGTCGCTCCAGAGGCCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACG 62864 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | || || || |||| ||| || | || | | | | |||| ||||| | || || || Sbjct 62865 ACTTGGAACTCGCCGGCCAGGACACGACGAGAGTAGATGTTGCTGGTGTACGGCTCAAAG 62924 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 ||| ||| || | ||||| | ||||| || |||||||| || || | |||||| Sbjct 62925 CACTCATTGAACCCCATGATCTGCGATGTGCTTGCTGTGGGCATAGGCGCGACGAGCAGA 62984 Query 204314 GAGTTGCGCACACCGTATTTTTGGACCCTGCG-CTTCAGAGAGGTCCAGTCGTGCATCGC 204372 |||||||| || || | | || || ||| ||| || | ||| || || | Sbjct 62985 GAGTTGCGGACGCCATGCACTGCGATCC-GCGCCTTGAGGGCTTCCCAATCCCACAAGTC 63043 Query 204373 ACTGGGTTTCACGCCCCACATGTCG 204397 | ||||| |||| |||||||||||| Sbjct 63044 AGTGGGTGTCACACCCCACATGTCG 63068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795152894049920