Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq19 104 4e-17
>seq19
Length=770886
Score = 104 bits (114), Expect = 4e-17
Identities = 369/565 (65%), Gaps = 9/565 (2%)
Strand=Plus/Plus
Query 203838 TCTTG-TCCACCGTGAACTGAATGG-CGTTCACGGCAGGCCTGCTTCTCAGATAGTACAT 203895
||||| || || |||||||| |||| || | | ||| | | || | | || ||||||||
Sbjct 62508 TCTTGATCGACAGTGAACTGGATGGGCGCTGA-GGCGGCCATGGTGCGGAGGTAGTACAT 62566
Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955
||| ||||| || || |||| ||| | ||||||||| | | |||| || |
Sbjct 62567 GCCAGTCTTAAGTCCTAGACGCCAGCCGGTGAAGTGCATGGACGTGATCTTGCCCATCGT 62626
Query 203956 GGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTG 204014
|| || |||||| ||||| || |||||| || |||||| |||||||| ||||| |
Sbjct 62627 CGGCTCCTTCATGTGGATGTTTAGCGACTGGGACTGATCGATG-AAGGCGCCACGATCGG 62685
Query 204015 CGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGG 204074
| | ||| | ||| ||| | ||| |||||||| || ||||| ||| || ||
Sbjct 62686 CTGACATCTGGATGATGTTGCGCTGGCTGATCTCCCAGACAGTCTTATACAGCTCCTTGA 62745
Query 204075 TGTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133
| | | || | || | | | || ||| ||||| || || || | | ||
Sbjct 62746 TCTCGTCGGGGATAT-TGGGAATGCGCTGGATAGAGCCACCATCTGCGATGATGCGGTTC 62804
Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193
|| | | || | ||| | ||||| || || ||| | ||| |||||||| |
Sbjct 62805 TTCATGTTGTCGCTCCAGAGGCCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACG 62864
Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253
| || || || |||| ||| || | || | | | | |||| ||||| | || || ||
Sbjct 62865 ACTTGGAACTCGCCGGCCAGGACACGACGAGAGTAGATGTTGCTGGTGTACGGCTCAAAG 62924
Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313
||| ||| || | ||||| | ||||| || |||||||| || || | ||||||
Sbjct 62925 CACTCATTGAACCCCATGATCTGCGATGTGCTTGCTGTGGGCATAGGCGCGACGAGCAGA 62984
Query 204314 GAGTTGCGCACACCGTATTTTTGGACCCTGCG-CTTCAGAGAGGTCCAGTCGTGCATCGC 204372
|||||||| || || | | || || ||| ||| || | ||| || || |
Sbjct 62985 GAGTTGCGGACGCCATGCACTGCGATCC-GCGCCTTGAGGGCTTCCCAATCCCACAAGTC 63043
Query 204373 ACTGGGTTTCACGCCCCACATGTCG 204397
| ||||| |||| ||||||||||||
Sbjct 63044 AGTGGGTGTCACACCCCACATGTCG 63068
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795152894049920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |