Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq2 156 1e-32
seq23 96.9 8e-15
seq29 95.1 3e-14
>seq2
Length=2712501
Score = 156 bits (172), Expect = 1e-32
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| || ||||||||||| |||| |||||| || ||| ||||| || ||
Sbjct 1305838 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTCAAGGTCCTGCCGTCC 1305779
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||| |||||| || ||||||||||||||||||||||| || || || || |||
Sbjct 1305778 TCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATACCCTCCTTATCC 1305719
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||||||| |||| ||||||| || ||| || || | |||||| |||
Sbjct 1305718 TGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACCTCGAGCGTGATGGTC 1305659
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || |||||||| || || ||||||||
Sbjct 1305658 TTGCCTGTGAGAGTCTTGACGAAAATTTG 1305630
Score = 156 bits (172), Expect = 1e-32
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| || ||||||||||| |||| |||||| || ||| ||||| || ||
Sbjct 1361965 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTCAAGGTCCTGCCGTCC 1361906
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||| |||||| || ||||||||||||||||||||||| || || || || |||
Sbjct 1361905 TCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATACCCTCCTTATCC 1361846
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||||||| |||| ||||||| || ||| || || | |||||| |||
Sbjct 1361845 TGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACCTCGAGCGTGATGGTC 1361786
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || |||||||| || || ||||||||
Sbjct 1361785 TTGCCTGTGAGAGTCTTGACGAAAATTTG 1361757
Score = 156 bits (172), Expect = 1e-32
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| || ||||||||||| |||| |||||| || ||| ||||| || ||
Sbjct 1459490 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTCAAGGTCCTGCCGTCC 1459431
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||| |||||| || ||||||||||||||||||||||| || || || || |||
Sbjct 1459430 TCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATACCCTCCTTATCC 1459371
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||||||| |||| ||||||| || ||| || || | |||||| |||
Sbjct 1459370 TGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACCTCGAGCGTGATGGTC 1459311
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || |||||||| || || ||||||||
Sbjct 1459310 TTGCCTGTGAGAGTCTTGACGAAAATTTG 1459282
Score = 150 bits (166), Expect = 4e-31
Identities = 164/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | ||| || | ||| || ||||||||||| |||| ||||||||| ||| |||
Sbjct 1333679 CGTAGACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTC 1333620
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| |||| |||||| || |||||||| |||||||||||||| || || ||
Sbjct 1333619 CGGCCATCCTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGGTCTGGTGGGATACCC 1333560
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||||||| |||| ||||| | || |||||| || | |
Sbjct 1333559 TCCTTGTCCTGGATCTTCGACTTCACGTTGTCGATCGTGTCGGATGATTCTACCTCGAGC 1333500
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || |||||||| || || || |||||
Sbjct 1333499 GTGATGGTCTTGCCTGTGAGAGTCTTGACGAAGATTTG 1333462
Score = 125 bits (138), Expect = 2e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| |||||||||||||||||||| |||| ||||||||| | | ||| | || ||
Sbjct 1305610 AGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCC 1305551
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || ||||| |||||||| ||||| ||||| ||||| ||| ||| || || |||
Sbjct 1305550 TCGAGTTGCTTGCCGGCGAAAATGAGGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCC 1305491
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| || |||| |||||| | | || || || | ||||| |||
Sbjct 1305490 TGGATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTC 1305431
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || || || || ||
Sbjct 1305430 TTGCCGGTGAGGGTCTTGACGAAGATCTG 1305402
Score = 125 bits (138), Expect = 2e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| |||||||| || |||||||| |||| ||||||||| | | ||| | || ||
Sbjct 1333442 AGGACGAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCC 1333383
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || ||||| |||||||| ||||| ||||||||||| ||| ||| || || |||
Sbjct 1333382 TCGAGTTGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCC 1333323
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| |||||| | | || || || | ||||| |||
Sbjct 1333322 TGGATCTTCGACTTGACGTTGTCGATGGTGTCGGAGGACTCAACCTCGAGGGTGATGGTC 1333263
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || || || || ||
Sbjct 1333262 TTGCCAGTGAGGGTCTTGACGAAGATCTG 1333234
Score = 125 bits (138), Expect = 2e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| |||||||||||||||||||| |||| ||||||||| | | ||| | || ||
Sbjct 1361737 AGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCC 1361678
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || ||||| |||||||| ||||| ||||| ||||| ||| ||| || || |||
Sbjct 1361677 TCGAGTTGCTTGCCGGCGAAAATGAGGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCC 1361618
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| || |||| |||||| | | || || || | ||||| |||
Sbjct 1361617 TGGATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTC 1361558
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || || || || ||
Sbjct 1361557 TTGCCGGTGAGGGTCTTGACGAAGATCTG 1361529
Score = 125 bits (138), Expect = 2e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| |||||||||||||||||||| |||| ||||||||| | | ||| | || ||
Sbjct 1459262 AGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCC 1459203
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || ||||| |||||||| ||||| ||||| ||||| ||| ||| || || |||
Sbjct 1459202 TCGAGTTGCTTGCCGGCGAAAATGAGGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCC 1459143
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| || |||| |||||| | | || || || | ||||| |||
Sbjct 1459142 TGGATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTC 1459083
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || || || || ||
Sbjct 1459082 TTGCCGGTGAGGGTCTTGACGAAGATCTG 1459054
Score = 100 bits (110), Expect = 7e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| || || || || |||||||| |||| ||||||||| | | || | |||||
Sbjct 1305382 AGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 1305323
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| ||||||||||| | ||||||||||| ||| ||| || || ||
Sbjct 1305322 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCT 1305263
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| || |||| |||||| | | || || || | ||||| |||
Sbjct 1305262 TGGATCTTGCTCTTGACATTGTCGATGGTGTCGGAGCTCTCCACCTCAAGGGTGATGGTC 1305203
Query 199598 TTACCCGTGAGAGTTTTCACAAA 199620
|| || || | ||||| || ||
Sbjct 1305202 TTGCCGGTCAAGGTTTTGACGAA 1305180
Score = 100 bits (110), Expect = 7e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| || || || || |||||||| |||| ||||||||| | | || | |||||
Sbjct 1361509 AGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 1361450
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| ||||||||||| | ||||||||||| ||| ||| || || ||
Sbjct 1361449 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCT 1361390
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| || |||| |||||| | | || || || | ||||| |||
Sbjct 1361389 TGGATCTTGCTCTTGACATTGTCGATGGTGTCGGAGCTCTCCACCTCAAGGGTGATGGTC 1361330
Query 199598 TTACCCGTGAGAGTTTTCACAAA 199620
|| || || | ||||| || ||
Sbjct 1361329 TTGCCGGTCAAGGTTTTGACGAA 1361307
Score = 100 bits (110), Expect = 7e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| || || || || |||||||| |||| ||||||||| | | || | |||||
Sbjct 1459034 AGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 1458975
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| ||||||||||| | ||||||||||| ||| ||| || || ||
Sbjct 1458974 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCT 1458915
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| || |||| |||||| | | || || || | ||||| |||
Sbjct 1458914 TGGATCTTGCTCTTGACATTGTCGATGGTGTCGGAGCTCTCCACCTCAAGGGTGATGGTC 1458855
Query 199598 TTACCCGTGAGAGTTTTCACAAA 199620
|| || || | ||||| || ||
Sbjct 1458854 TTGCCGGTCAAGGTTTTGACGAA 1458832
Score = 96.9 bits (106), Expect = 8e-15
Identities = 134/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| || || || || |||||||| |||| ||||||||| | | || | |||||
Sbjct 1333214 AGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 1333155
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| ||||||||||| | ||||||||||| ||| ||| || || ||
Sbjct 1333154 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCT 1333095
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| || |||| |||||| | | || || || | ||||| |||
Sbjct 1333094 TGGATCTTGCTCTTGACATTGTCGATGGTGTCGGAGCTCTCCACCTCAAGGGTGATGGTC 1333035
Query 199598 TTACCCGT 199605
|| || ||
Sbjct 1333034 TTGCCGGT 1333027
>seq23
Length=594546
Score = 96.9 bits (106), Expect = 8e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
|||| |||| |||||| ||| || ||||| ||||| || ||||||||||||||||| |
Sbjct 495720 CCTTCTGGATGTTGTAATCACTCAGTGTCCTGCCATCCTCAAGCTGCTTTCCGGCGAAAA 495779
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| | ||||||||||| || ||||| || ||||| ||||| ||| || |
Sbjct 495780 TCAAGCGCTGCTGGTCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 495839
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||| ||||| | | || || || | ||||| ||||| |||||||| || || || |
Sbjct 495840 CGATCGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGA 495899
Query 199620 A 199620
|
Sbjct 495900 A 495900
Score = 93.3 bits (102), Expect = 1e-13
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
|||| |||| |||||| | | || ||||| ||||| || ||||||||||||||||| |
Sbjct 438875 CCTTCTGGATGTTGTAATTACTCAGTGTCCTGCCATCCTCAAGCTGCTTTCCGGCGAAAA 438934
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| | ||||||||||| || ||||| || ||||| ||||| ||| || |
Sbjct 438935 TCAAGCGCTGCTGGTCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 438994
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||| ||||| | | || || || | ||||| ||||| |||||||| || || || |
Sbjct 438995 CGATCGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGA 439054
Query 199620 A 199620
|
Sbjct 439055 A 439055
>seq29
Length=482220
Score = 95.1 bits (104), Expect = 3e-14
Identities = 87/110 (79%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | |||||| ||||| |||||||||||||| |||| ||||||||| | | ||
Sbjct 457311 CGGAGGCGCAGGACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTG 457252
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
| || || || |||||||| ||||||||||| | ||||||||||| ||
Sbjct 457251 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGG 457202
Score = 87.8 bits (96), Expect = 4e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| |||||||||||||| |||| |||||||| | | || | || ||
Sbjct 360697 AGGACCAGGTGAAGAGTCGACTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGGCCGTCC 360638
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
|| |||||||| ||||||||||| | ||||||||||| ||
Sbjct 360637 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGG 360597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178918095655544
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