Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq2 105 4e-18
>seq2
Length=2712501
Score = 105 bits (116), Expect = 4e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| ||||| | || | || || || || || ||||| ||
Sbjct 1333421 TCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAA 1333362
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||||||| | || | ||||||||||| |||||| ||||||
Sbjct 1333361 ATGAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 1333302
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || || |||||| |||| ||| ||||| || || ||||| ||||| ||
Sbjct 1333301 TCGATGGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACG 1333242
Query 34971 AAGATCTGCAT 34981
|||||||||||
Sbjct 1333241 AAGATCTGCAT 1333231
Score = 95.1 bits (104), Expect = 8e-15
Identities = 140/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| ||||| | || | || || || || || ||||| ||
Sbjct 1305589 TCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAA 1305530
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || || |||||| | || | ||||||||||| |||||| ||||| ||
Sbjct 1305529 ATGAGGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGAC--AT 1305472
Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
| ||||| || | |||||| |||| ||| ||||| || || ||||| |||||
Sbjct 1305471 --TGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTT 1305414
Query 34967 CACAAAGATCTGCATA 34982
|| ||||||||||||
Sbjct 1305413 GACGAAGATCTGCATA 1305398
Score = 95.1 bits (104), Expect = 8e-15
Identities = 140/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| ||||| | || | || || || || || ||||| ||
Sbjct 1361716 TCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAA 1361657
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || || |||||| | || | ||||||||||| |||||| ||||| ||
Sbjct 1361656 ATGAGGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGAC--AT 1361599
Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
| ||||| || | |||||| |||| ||| ||||| || || ||||| |||||
Sbjct 1361598 --TGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTT 1361541
Query 34967 CACAAAGATCTGCATA 34982
|| ||||||||||||
Sbjct 1361540 GACGAAGATCTGCATA 1361525
Score = 95.1 bits (104), Expect = 8e-15
Identities = 140/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| ||||| | || | || || || || || ||||| ||
Sbjct 1459241 TCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAA 1459182
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || || |||||| | || | ||||||||||| |||||| ||||| ||
Sbjct 1459181 ATGAGGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGAC--AT 1459124
Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
| ||||| || | |||||| |||| ||| ||||| || || ||||| |||||
Sbjct 1459123 --TGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTT 1459066
Query 34967 CACAAAGATCTGCATA 34982
|| ||||||||||||
Sbjct 1459065 GACGAAGATCTGCATA 1459050
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324632682098496
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |