Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq1 288 2e-72
>seq1
Length=3303888
Score = 288 bits (318), Expect = 2e-72
Identities = 581/854 (68%), Gaps = 16/854 (2%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| |||||||| ||||| || | | |||||||||||
Sbjct 529202 CTGGTAGTCACCTACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGCGAGGGAGATGTTCTC 529143
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATA-CACCCG-TGTCAGGCCCATCTGTTC---C 47953
||||||| ||||||||||| | ||| || || | ||| |||| | || |
Sbjct 529142 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGCTGT--GGCCAA---GTGCGAGG 529088
Query 47954 AGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013
|| ||| |||| ||||| |||||||||| | ||||||| || ||||||||| |
Sbjct 529087 AGTAGGCGATCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGA 529028
Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073
|| | ||||| || | | ||| ||||| | ||| |||| || |||||| |
Sbjct 529027 AGTGCGCAGGGCAGGGCGTCCGAGAGGAACTCTTGCTCAATCTCGACAGCTTCCGTGATG 528968
Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133
||||| | ||| || ||| || |||||||| || || || | |||||||||
Sbjct 528967 ATCTGGTGGACGAGGTCGAGTGATGGCTTGTTGCGGAGATG---TGCGTGCAGCATGCAG 528911
Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193
|| ||||| |||||| ||| ||||| ||| ||||||| ||||||||||| ||| ||
Sbjct 528910 GCGAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCG 528851
Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253
||||||| ||| | || || |||||||| || || ||||| |||||||||||||||||
Sbjct 528850 GGCATGAGCCCGCGCTTCTTCAGCCAGAAGATGGCGGCGAATGAGCCAGAGAAGAAGATA 528791
Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313
||||| || || ||||| ||| |||| | ||||| | | | ||| ||||
Sbjct 528790 CCCTCGACAGCTGCGAAAGCGATGAGACGGCAGCCGAAGGTCGATGCATCGTCGCTGATC 528731
Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373
|| || ||||| | |||||||| |||||| || || | || ||||| ||||
Sbjct 528730 CACTTGAGTGCCCAATTGGCCTTCTTGCGGATGCAGGGGATGTTGTCGATGGCGTTGAAG 528671
Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433
|| | ||| | | | || | ||||| || || || ||| ||||
Sbjct 528670 AGGTATGTGCGTTGGCGAGGTTCACTGATGTAGGTGTCGATGAGTAGTGAGTAGGTCTCG 528611
Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493
||||| | ||||| || ||||||||| ||||||||| | || || | ||
Sbjct 528610 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCGTCGGGTATTTGG 528551
Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553
|| || ||| | ||| | ||| ||||| ||||| || || ||||| || || |||
Sbjct 528550 ACCTCACCACTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCTGATGCGGCGAAG 528491
Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA-GC--ATTCCAGCCC 48610
|||||||| |||||| || ||| ||||||| | | ||||| || |||||| |
Sbjct 528490 AAGGCAAGCACATGTGAAATGAAGAATCGCTCGTCATCGTTGAGACGCTTGTTCCAGTCG 528431
Query 48611 TGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTG 48670
|| | || || |||||| | || || | |||||||| || || ||| || |||
Sbjct 528430 TGCAGATCCTTCGACAGGTCGATCTCCTCTGCTGTCCAGAATGATGCCTCTGCCTTCTTG 528371
Query 48671 TACATGCCCCATAT 48684
||||| ||||||
Sbjct 528370 TACATCTGCCATAT 528357
Score = 282 bits (312), Expect = 8e-71
Identities = 585/860 (68%), Gaps = 28/860 (3%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| |||||||| ||||| || | | |||||||||||
Sbjct 494835 CTGGTAGTCACCTACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGCGAGGGAGATGTTCTC 494776
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATAC-AC---CCGTGTCAGGCCCATCTGTTCCA 47954
||||||| ||||||||||| | ||| || || ||||| ||| | || | |
Sbjct 494775 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGCCGTG----GCCGA---GTGCGA 494723
Query 47955 GCAG---GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTA 48011
| || | | || |||||| |||||||||| | ||||||| || ||||||||| |
Sbjct 494722 GGAGTAGGCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGA 494663
Query 48012 TGAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCA 48071
|| | ||| | || | || ||| ||||| | ||| |||| || |||||| |
Sbjct 494662 GAAGTGCGCAGGGTAGGGCGTCTGAGAGGAACTCTTGCTCGATCTCGACAGCTTCCGTGA 494603
Query 48072 CAATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGC 48131
||||| | || || ||| || |||||||| || || || | ||||| |
Sbjct 494602 TGATCTGGTGGACAAGGTCGAGTGATGGCTTGTTGCGGAGATGT---GCGTGCAGCATAC 494546
Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191
|||| ||||| |||||| ||| ||||| ||| |||||| ||||||||||| ||| |
Sbjct 494545 AGGCGAAGTCGGTGTGCATGCCCTCGTCACGGGAAATGAGCTCGTTGGAGAAGGTGAGGC 494486
Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251
| ||||| | ||| | || ||||||||||| || || ||||| || ||||||||||| |
Sbjct 494485 CGGGCATCAGCCCGCGCTTCTTGAGCCAGAAGATAGCGGCGAACGAACCAGAGAAGAAAA 494426
Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAA---AGAAGCGTTCTTGTCTG 48308
||||||| || || || || || |||| | ||||| || ||| | |||
Sbjct 494425 TGCCCTCGACAGCTGCAAAGGCAATGAGACGGCAGCCGAAGGTCGATGCG---TCGTCGC 494369
Query 48309 AGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCC 48368
|||||| || ||||||| |||||||| |||||| || || | || |||||
Sbjct 494368 TGATCCACTTTAGTGCCCAGTTGGCCTTCTTGCGGATGCACGGGATGTTGTCGATGGCGT 494309
Query 48369 GGAAGAGCTTCTTGCACTCACCTGCGTCCGC-AACATAGGTAGTGAGCAGCTTTGCGTAC 48427
||||| | ||| | | | || ||| | ||||| || || || |||
Sbjct 494308 TAAAGAGGTATGTGCGTTGGCGAG-GTTCGCTGATGTAGGTGTCGATGAGTAGTGAGTAG 494250
Query 48428 ATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAAC 48487
|||| ||||| | |||||| || ||||||||| ||||||||| | ||||||
Sbjct 494249 GTCTCGGAGTGGATATTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCAGGG 494190
Query 48488 ACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCA 48547
| ||||| || ||||| ||| | ||| ||||| ||||| || || ||||| ||
Sbjct 494189 ATTTGCACCTCGCCACTGAATCGCTCGACCAGGTTCTCGTTGACGATGCCGTCTGATGCG 494130
Query 48548 GCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA-GC--ATTC 48604
|| ||||||||||| |||||| || ||| ||||||| | ||||| || |||
Sbjct 494129 GCGAAGAAGGCAAGCACATGTGAAATGAAGAATCGCTCGTCATCATTGAGACGCTTGTTC 494070
Query 48605 CAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCT 48664
||| | || | ||||| ||| || | || || | |||||||| || || |||
Sbjct 494069 CAGTCGTGCAGATCTTTCGACAGATCAATCTCCTCTGCTGTCCAGAATGATGCCTCTGCC 494010
Query 48665 TTTTTGTACATGCCCCATAT 48684
|| |||||||| ||||||
Sbjct 494009 TTCTTGTACATCTGCCATAT 493990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931530098554880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |