Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045. 2_202017-04-03] 232 sequences; 44,765,267 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1 288 2e-72 >seq1 Length=3303888 Score = 288 bits (318), Expect = 2e-72 Identities = 581/854 (68%), Gaps = 16/854 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 529202 CTGGTAGTCACCTACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGCGAGGGAGATGTTCTC 529143 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATA-CACCCG-TGTCAGGCCCATCTGTTC---C 47953 ||||||| ||||||||||| | ||| || || | ||| |||| | || | Sbjct 529142 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGCTGT--GGCCAA---GTGCGAGG 529088 Query 47954 AGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 || ||| |||| ||||| |||||||||| | ||||||| || ||||||||| | Sbjct 529087 AGTAGGCGATCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGA 529028 Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 || | ||||| || | | ||| ||||| | ||| |||| || |||||| | Sbjct 529027 AGTGCGCAGGGCAGGGCGTCCGAGAGGAACTCTTGCTCAATCTCGACAGCTTCCGTGATG 528968 Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 ||||| | ||| || ||| || |||||||| || || || | ||||||||| Sbjct 528967 ATCTGGTGGACGAGGTCGAGTGATGGCTTGTTGCGGAGATG---TGCGTGCAGCATGCAG 528911 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 || ||||| |||||| ||| ||||| ||| ||||||| ||||||||||| ||| || Sbjct 528910 GCGAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCG 528851 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||||| ||| | || || |||||||| || || ||||| ||||||||||||||||| Sbjct 528850 GGCATGAGCCCGCGCTTCTTCAGCCAGAAGATGGCGGCGAATGAGCCAGAGAAGAAGATA 528791 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || || ||||| ||| |||| | ||||| | | | ||| |||| Sbjct 528790 CCCTCGACAGCTGCGAAAGCGATGAGACGGCAGCCGAAGGTCGATGCATCGTCGCTGATC 528731 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373 || || ||||| | |||||||| |||||| || || | || ||||| |||| Sbjct 528730 CACTTGAGTGCCCAATTGGCCTTCTTGCGGATGCAGGGGATGTTGTCGATGGCGTTGAAG 528671 Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433 || | ||| | | | || | ||||| || || || ||| |||| Sbjct 528670 AGGTATGTGCGTTGGCGAGGTTCACTGATGTAGGTGTCGATGAGTAGTGAGTAGGTCTCG 528611 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || ||||||||| ||||||||| | || || | || Sbjct 528610 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCGTCGGGTATTTGG 528551 Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553 || || ||| | ||| | ||| ||||| ||||| || || ||||| || || ||| Sbjct 528550 ACCTCACCACTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCTGATGCGGCGAAG 528491 Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA-GC--ATTCCAGCCC 48610 |||||||| |||||| || ||| ||||||| | | ||||| || |||||| | Sbjct 528490 AAGGCAAGCACATGTGAAATGAAGAATCGCTCGTCATCGTTGAGACGCTTGTTCCAGTCG 528431 Query 48611 TGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTG 48670 || | || || |||||| | || || | |||||||| || || ||| || ||| Sbjct 528430 TGCAGATCCTTCGACAGGTCGATCTCCTCTGCTGTCCAGAATGATGCCTCTGCCTTCTTG 528371 Query 48671 TACATGCCCCATAT 48684 ||||| |||||| Sbjct 528370 TACATCTGCCATAT 528357 Score = 282 bits (312), Expect = 8e-71 Identities = 585/860 (68%), Gaps = 28/860 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 494835 CTGGTAGTCACCTACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGCGAGGGAGATGTTCTC 494776 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATAC-AC---CCGTGTCAGGCCCATCTGTTCCA 47954 ||||||| ||||||||||| | ||| || || ||||| ||| | || | | Sbjct 494775 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGCCGTG----GCCGA---GTGCGA 494723 Query 47955 GCAG---GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTA 48011 | || | | || |||||| |||||||||| | ||||||| || ||||||||| | Sbjct 494722 GGAGTAGGCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGA 494663 Query 48012 TGAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCA 48071 || | ||| | || | || ||| ||||| | ||| |||| || |||||| | Sbjct 494662 GAAGTGCGCAGGGTAGGGCGTCTGAGAGGAACTCTTGCTCGATCTCGACAGCTTCCGTGA 494603 Query 48072 CAATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGC 48131 ||||| | || || ||| || |||||||| || || || | ||||| | Sbjct 494602 TGATCTGGTGGACAAGGTCGAGTGATGGCTTGTTGCGGAGATGT---GCGTGCAGCATAC 494546 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 |||| ||||| |||||| ||| ||||| ||| |||||| ||||||||||| ||| | Sbjct 494545 AGGCGAAGTCGGTGTGCATGCCCTCGTCACGGGAAATGAGCTCGTTGGAGAAGGTGAGGC 494486 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 | ||||| | ||| | || ||||||||||| || || ||||| || ||||||||||| | Sbjct 494485 CGGGCATCAGCCCGCGCTTCTTGAGCCAGAAGATAGCGGCGAACGAACCAGAGAAGAAAA 494426 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAA---AGAAGCGTTCTTGTCTG 48308 ||||||| || || || || || |||| | ||||| || ||| | ||| Sbjct 494425 TGCCCTCGACAGCTGCAAAGGCAATGAGACGGCAGCCGAAGGTCGATGCG---TCGTCGC 494369 Query 48309 AGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCC 48368 |||||| || ||||||| |||||||| |||||| || || | || ||||| Sbjct 494368 TGATCCACTTTAGTGCCCAGTTGGCCTTCTTGCGGATGCACGGGATGTTGTCGATGGCGT 494309 Query 48369 GGAAGAGCTTCTTGCACTCACCTGCGTCCGC-AACATAGGTAGTGAGCAGCTTTGCGTAC 48427 ||||| | ||| | | | || ||| | ||||| || || || ||| Sbjct 494308 TAAAGAGGTATGTGCGTTGGCGAG-GTTCGCTGATGTAGGTGTCGATGAGTAGTGAGTAG 494250 Query 48428 ATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAAC 48487 |||| ||||| | |||||| || ||||||||| ||||||||| | |||||| Sbjct 494249 GTCTCGGAGTGGATATTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCAGGG 494190 Query 48488 ACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCA 48547 | ||||| || ||||| ||| | ||| ||||| ||||| || || ||||| || Sbjct 494189 ATTTGCACCTCGCCACTGAATCGCTCGACCAGGTTCTCGTTGACGATGCCGTCTGATGCG 494130 Query 48548 GCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA-GC--ATTC 48604 || ||||||||||| |||||| || ||| ||||||| | ||||| || ||| Sbjct 494129 GCGAAGAAGGCAAGCACATGTGAAATGAAGAATCGCTCGTCATCATTGAGACGCTTGTTC 494070 Query 48605 CAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCT 48664 ||| | || | ||||| ||| || | || || | |||||||| || || ||| Sbjct 494069 CAGTCGTGCAGATCTTTCGACAGATCAATCTCCTCTGCTGTCCAGAATGATGCCTCTGCC 494010 Query 48665 TTTTTGTACATGCCCCATAT 48684 || |||||||| |||||| Sbjct 494009 TTCTTGTACATCTGCCATAT 493990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530098554880