Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045. 2_202017-04-03] 232 sequences; 44,765,267 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1 149 7e-31 >seq1 Length=3303888 Score = 149 bits (164), Expect = 7e-31 Identities = 342/502 (68%), Gaps = 16/502 (3%) Strand=Plus/Plus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCG 65081 |||||||| || |||||| | || ||| | | || | | ||| |||||| | || Sbjct 528705 AAGAAGGCCAATTGGGCACTCAAGTGGATCAGCGACGATGCATCGA-CCTTCGGCTGCCG 528763 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 || | || || || ||| ||||||||||||||||| || |||||| ||| || | Sbjct 528764 TCTCATCGCTTTCGCAGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCGCCATCTT 528823 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 ||| |||||||||| || |||||||| ||||| |||||| || || || || ||||| Sbjct 528824 CTGGCTGAAGAAGCGCGGGCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCG 528883 Query 65202 AGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAG-AC-TTTGCGTAATAGA 65259 || ||||| | ||| || || ||| || | || || | || | | || || | | Sbjct 528884 TGACGAGGGCATGCACACCGACTTCGCC-TGCA-TGCTGCACGCACATCTCCGCAACA-A 528940 Query 65260 CCCACTAC-CGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTT 65318 ||| || ||| ||||| ||| | | || || || ||||||||| ||| ||| Sbjct 528941 GCCATCACTCGACCTCGTCCACCAGATCATCACGGAAGCTGTCGAGATTGAGCAAGAGTT 529000 Query 65319 CATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTA 65378 | ||| |||||| || || || || |||| |||||| | || |||| | |||| Sbjct 529001 CCTCTCGGACGCCCTGCCCTGCGCACTTCTCGGCATGAACGCCAAGCTCATGTGCCAGTA 529060 Query 65379 CATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCAC--CCATT--TGGA 65434 ||| |||| ||| | ||||| || ||| | ||| ||||| | | | | | Sbjct 529061 CATCGAGTTTGTCGCTGATCGCCTACTCCTCGCACTTG----GCCACAGCAAGTACTACA 529116 Query 65435 ACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCT 65494 |||| | || || || ||||| ||||| ||||| ||| | || ||||| ||||||| Sbjct 529117 ACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGCCGGCAAGACGAACTTCT 529176 Query 65495 TTGAGAAGCGAGTTGGGGACTA 65516 | |||||||| || || ||||| Sbjct 529177 TCGAGAAGCGCGTAGGTGACTA 529198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567869948160