Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1 149 7e-31
>seq1
Length=3303888
Score = 149 bits (164), Expect = 7e-31
Identities = 342/502 (68%), Gaps = 16/502 (3%)
Strand=Plus/Plus
Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCG 65081
|||||||| || |||||| | || ||| | | || | | ||| |||||| | ||
Sbjct 528705 AAGAAGGCCAATTGGGCACTCAAGTGGATCAGCGACGATGCATCGA-CCTTCGGCTGCCG 528763
Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141
|| | || || || ||| ||||||||||||||||| || |||||| ||| || |
Sbjct 528764 TCTCATCGCTTTCGCAGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCGCCATCTT 528823
Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201
||| |||||||||| || |||||||| ||||| |||||| || || || || |||||
Sbjct 528824 CTGGCTGAAGAAGCGCGGGCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCG 528883
Query 65202 AGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAG-AC-TTTGCGTAATAGA 65259
|| ||||| | ||| || || ||| || | || || | || | | || || | |
Sbjct 528884 TGACGAGGGCATGCACACCGACTTCGCC-TGCA-TGCTGCACGCACATCTCCGCAACA-A 528940
Query 65260 CCCACTAC-CGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTT 65318
||| || ||| ||||| ||| | | || || || ||||||||| ||| |||
Sbjct 528941 GCCATCACTCGACCTCGTCCACCAGATCATCACGGAAGCTGTCGAGATTGAGCAAGAGTT 529000
Query 65319 CATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTA 65378
| ||| |||||| || || || || |||| |||||| | || |||| | ||||
Sbjct 529001 CCTCTCGGACGCCCTGCCCTGCGCACTTCTCGGCATGAACGCCAAGCTCATGTGCCAGTA 529060
Query 65379 CATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCAC--CCATT--TGGA 65434
||| |||| ||| | ||||| || ||| | ||| ||||| | | | | |
Sbjct 529061 CATCGAGTTTGTCGCTGATCGCCTACTCCTCGCACTTG----GCCACAGCAAGTACTACA 529116
Query 65435 ACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCT 65494
|||| | || || || ||||| ||||| ||||| ||| | || ||||| |||||||
Sbjct 529117 ACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGCCGGCAAGACGAACTTCT 529176
Query 65495 TTGAGAAGCGAGTTGGGGACTA 65516
| |||||||| || || |||||
Sbjct 529177 TCGAGAAGCGCGTAGGTGACTA 529198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596567869948160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |