Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq1 158 1e-32
seq8 156 5e-32
seq19 93.3 5e-13
seq12 93.3 5e-13
seq9 89.7 6e-12
>seq1
Length=3303888
Score = 158 bits (174), Expect = 1e-32
Identities = 225/314 (72%), Gaps = 2/314 (1%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || |||||| |||||| ||||| |||||||| |||| |||||
Sbjct 494840 GCCTTCTGGTAGTCACCTACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGCGAGGGAGATG 494781
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | ||| ||||||| | ||||||| ||| || ||||| | |
Sbjct 494780 TTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGCCGTGGCCGAGTGCGAGG 494721
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
|| |||||||| ||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 494720 AGTAGGCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGA 494661
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| || || || | || | ||||||| |||||||||||| || || ||||
Sbjct 494660 AGTGCGCAGGGTAGGGCGTCTGAGAGGAACTCTTGCTCGATCTCGACAGCTTCCGTGATG 494601
Query 868931 ATCTGCCTGGGC-ACGTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGC 868989
||||| ||| | | |||| || ||||||||| ||| | || |||| |||||
Sbjct 494600 ATCTG-GTGGACAAGGTCGAGTGATGGCTTGTTGCGGAGATGTGCGTGCAGCATACAGGC 494542
Query 868990 AAAGTCGCAGTGCA 869003
|||||| |||||
Sbjct 494541 GAAGTCGGTGTGCA 494528
Score = 154 bits (170), Expect = 2e-31
Identities = 224/314 (71%), Gaps = 2/314 (1%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || |||||| |||||| ||||| |||||||| |||| |||||
Sbjct 529207 GCCTTCTGGTAGTCACCTACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGCGAGGGAGATG 529148
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | ||| ||||||| | ||||||| ||| | || || | |
Sbjct 529147 TTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGCTGTGGCCAAGTGCGAGG 529088
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
|| ||||| || ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 529087 AGTAGGCGATCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGA 529028
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| || ||||| | || | ||||||| ||| |||||||| || || ||||
Sbjct 529027 AGTGCGCAGGGCAGGGCGTCCGAGAGGAACTCTTGCTCAATCTCGACAGCTTCCGTGATG 528968
Query 868931 ATCTGCCTGGGC-ACGTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGC 868989
||||| ||| | | |||| || ||||||||| ||| | || |||| ||||||
Sbjct 528967 ATCTG-GTGGACGAGGTCGAGTGATGGCTTGTTGCGGAGATGTGCGTGCAGCATGCAGGC 528909
Query 868990 AAAGTCGCAGTGCA 869003
|||||| |||||
Sbjct 528908 GAAGTCGGTGTGCA 528895
Score = 150 bits (166), Expect = 2e-30
Identities = 196/265 (74%), Gaps = 7/265 (3%)
Strand=Plus/Minus
Query 869201 TCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAG 869260
|||||| |||| |||||||||||| || ||||||||||||||||| ||||| ||| |
Sbjct 494504 TCGTTGGAGAAGGTGAGGCCGGGCATCAGCCCGCGCTTCTTGAGCCAGAAGATAGCGGCG 494445
Query 869261 AAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAG 869320
|| || ||||| || ||||||||||| || |||||| | ||||| || | | |||
Sbjct 494444 AACGAACCAGAGAAGAAAATGCCCTCGACAGCTGCAAAGGCAATGAGACGGCAGCCGAAG 494385
Query 869321 GTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGAC 869380
||||| | | || | | |||||||||| | ||||||| |||||| || | | ||
Sbjct 494384 --GTCGATG-CGTCGTCGCTGATCCACTTTAGTGCCCAGTTGGCCTTCTTGCGGATGCAC 494328
Query 869381 GGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTTTCGGC-CGGGTCCTTGACATAGG 869438
|| | ||||||||||| |||||||| || | || ||| || || ||| ||||
Sbjct 494327 GGGATGTTGTCGATGGCGTTAAAGAGGTATGTGCGTT--GGCGAGGTTCGCTGATGTAGG 494270
Query 869439 TGTCGATCAGGAGCGAATAGGTCTC 869463
||||||| || || || ||||||||
Sbjct 494269 TGTCGATGAGTAGTGAGTAGGTCTC 494245
Score = 143 bits (158), Expect = 3e-28
Identities = 207/286 (72%), Gaps = 7/286 (2%)
Strand=Plus/Minus
Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239
|| ||||| || ||| | |||||| |||| ||||||||||||||| |||||||||
Sbjct 528892 CCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGCCCGCGCTTC 528833
Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299
|| ||||| ||||||||| ||| ||| ||||| ||||| |||||||| || || ||
Sbjct 528832 TTCAGCCAGAAGATGGCGGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGCTGCGAAA 528773
Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359
||||||| || | | ||| ||||| | | || | | |||||||||| | |||||
Sbjct 528772 GCGATGAGACGGCAGCCGAAG--GTCGATG-CATCGTCGCTGATCCACTTGAGTGCCCAA 528716
Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTTTC 869418
| |||||| || | | | || | ||||||||||| ||||||| || | ||
Sbjct 528715 TTGGCCTTCTTGCGGATGCAGGGGATGTTGTCGATGGCGTTGAAGAGGTATGTGCGTT-- 528658
Query 869419 GGC-CGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463
||| || || ||| ||||||||||| || || || ||||||||
Sbjct 528657 GGCGAGGTTCACTGATGTAGGTGTCGATGAGTAGTGAGTAGGTCTC 528612
>seq8
Length=1734925
Score = 156 bits (172), Expect = 5e-32
Identities = 146/183 (80%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 1592119 CGACATCTCGCCGTGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGT 1592177
||||||| | |||||| || |||| ||| | ||||| ||| | | || |||
Sbjct 1459425 CGACATCGAGGAGTGGGATCAGAAGTTCATGC-AGGTCGATCAGGAGATGTTATTCGAGA 1459483
Query 1592178 TGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTG 1592237
| |||||||| ||||||||| | ||||||||| ||||||||||| ||||||||||| | |
Sbjct 1459484 TCATCCTCGCTGCCAACTACATGGACATCAAGGCTCTGCTCGATGTTGGGTGCAAGACCG 1459543
Query 1592238 TGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGT 1592297
| || ||||||||||||||||||||||| || |||||||||||||| || |||||| ||
Sbjct 1459544 TCGCAAACATGATCAAGGGCAAGTCGCCTGAAGAGATCCGCAAGACGTTCAACATCCAGA 1459603
Query 1592298 ACG 1592300
|||
Sbjct 1459604 ACG 1459606
Score = 152 bits (168), Expect = 6e-31
Identities = 145/183 (79%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 1592119 CGACATCTCGCCGTGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGT 1592177
||||||| | ||||||| || |||| ||| | ||||| ||| | | || |||
Sbjct 1455013 CGACATCGAGGAGTGGGACCAGAAGTTCATGCAA-GTCGACCAGGAGATGTTGTTCGAGA 1455071
Query 1592178 TGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTG 1592237
| |||||||| ||||||||| | ||||||||| | || |||||| ||||||||||| | |
Sbjct 1455072 TCATCCTCGCTGCCAACTACATGGACATCAAGGCGCTTCTCGATGTTGGGTGCAAGACCG 1455131
Query 1592238 TGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGT 1592297
| || ||||||||||||||||||||||| || |||||||||||||| || |||||| ||
Sbjct 1455132 TCGCAAACATGATCAAGGGCAAGTCGCCTGAAGAGATCCGCAAGACGTTCAACATCCAGA 1455191
Query 1592298 ACG 1592300
|||
Sbjct 1455192 ACG 1455194
>seq19
Length=770886
Score = 93.3 bits (102), Expect = 5e-13
Identities = 324/503 (64%), Gaps = 16/503 (3%)
Strand=Plus/Plus
Query 1626982 TGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCCG 1627041
|| ||||| || |||||||||| | | ||||| | ||||||| || |||||||||||
Sbjct 62511 TGATCGACAGTGAACTGGATGGGCGCTGAGGCGGCCATGGTGCGGAGGTAGTACATGCCA 62570
Query 1627042 GTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGCG 1627101
||||| || || | ||||| || | |||||| |||||||| || | | | ||
Sbjct 62571 GTCTTAAGTCCTAGACGCCAGCCGGTGAAGTGCATGGACGTGAT---CTTGCCCAT--CG 62625
Query 1627102 TCGGCGC-----AGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGG 1627156
||||| | || | ||| ||||||||| ||| |||| ||| | |||||||
Sbjct 62626 TCGGCTCCTTCATGTGGATGTTTAGCGACTGGGACTGATCGATGAAGGCGCCACGATCGG 62685
Query 1627157 CCGCCATGTCGATGGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGA 1627216
| | ||| | |||| || || | | | |||||| || ||||| | | ||||||
Sbjct 62686 CTGACATCTGGATGATGTTGCGCTGGCTGATCTCCCAGACAGTCTTATACAGCTCCTTGA 62745
Query 1627217 GGTCGGGCGGCACCTCGTCGTCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCGACGAGCC 1627276
|| | ||| | | | || || ||| | ||||| | |||| || |
Sbjct 62746 TCTC-GTCGG-----GGATATTGGGAATGCGCTGGATAGAGCCACCATCTGCGATGATGC 62799
Query 1627277 TGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCAGGCGCTTGACCAGGTGGCGGT 1627336
|| | || | |||| ||||| | | ||| ||||| ||| | |||
Sbjct 62800 GGTTCTTCATGTTGTCGCTCCAGAGGCCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGT 62859
Query 1627337 TGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGACCT 1627396
|||| || || ||||| | || || || || | |||||||||| ||||| ||
Sbjct 62860 TGACGACTTGGAACTCGCCGGCCAGGACACGACGAGAGTAGATGTTGCTGGTGTACGGCT 62919
Query 1627397 CGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGA 1627456
| | ||| || |||| ||||||||| || | || |||||||| |||| ||||
Sbjct 62920 CAAAGCACTCATTGAACCCCATGATCTGCGATGTGCTTGCTGTGGGCATAGGCGCGACGA 62979
Query 1627457 GGAGCGAGTTGCGCAGGCCGTGC 1627479
| || |||||||| | ||| |||
Sbjct 62980 GCAGAGAGTTGCGGACGCCATGC 63002
>seq12
Length=1358697
Score = 93.3 bits (102), Expect = 5e-13
Identities = 307/468 (66%), Gaps = 12/468 (3%)
Strand=Plus/Plus
Query 1573775 CCTCCCGTGGATCGAAAAGTATCGCCCTATGGTGCTCGACGACATTGTCGGCAACGAGCA 1573834
|||||| ||| |||| ||||||||||| | | ||||| || || || |||||| | |
Sbjct 598506 CCTCCCCTGGGTCGAGAAGTATCGCCCCGTCTTCCTCGATGATATAGTAGGCAAC-ACCG 598564
Query 1573835 CGCCG-TCGCCTATCTCAGAGCGC-TGGCTGCCGACGGCGACATGCCCAACCTCTTGCTG 1573892
| || ||| |||| || | | || || ||| |||||||| || || | |
Sbjct 598565 AGACGATCGAGCGCCTCA-AGATCATCGCCAAAGATGGCAACATGCCCCACGTCATCATC 598623
Query 1573893 GCGGGTCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGC---GCGTGTCCTC 1573949
||| |||||||| ||||||||||| | |||||| || || | |||
Sbjct 598624 AGCGGTATGCCCGGCATTGGCAAGACCACCTCAGTTCTGTGTCTTGCTAGGCAATTGCTC 598683
Query 1573950 TTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTC 1574009
|||| || | | || || ||||| || || || || || ||||| || |
Sbjct 598684 ---GGCGACGCATACAAGGAAGCTGTGCTGGAGCTGAATGCTAGCGATGAGCGAGGTATT 598740
Query 1574010 GACGTCGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCGGA 1574069
||||| ||||| || ||||| | ||| |||| | || ||||| | |||
Sbjct 598741 GACGTGGTGCGGAATCGAATCAAAGGCTTCGCGCAGAAGAAGGTCACGTTGCCGGCTGGA 598800
Query 1574070 CGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCC 1574129
|| || ||| || |||||||||| ||||| ||| || | || || | || ||||||||
Sbjct 598801 CGGCAGAAGTTGGTCATCCTCGATGAGGCGGACAGCATGACATCCGGCGCTCAGCAGGCG 598860
Query 1574130 CTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAA-CAC 1574188
||||| || ||||| | ||| | ||| |||||||| || | ||||| || ||
Sbjct 598861 CTGCGAAGGACTATGGAGATCTACAGCGGCACTACGCGCTTCGCATTCGCGTGTAATCAG 598920
Query 1574189 GTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCG 1574236
| | | | |||||| || | ||| |||||||||||| |||||
Sbjct 598921 AGCAACAAAA-TAATCGAGCCCTTGCAATCTCGCTGCGCCATCCTGCG 598967
>seq9
Length=1716618
Score = 89.7 bits (98), Expect = 6e-12
Identities = 175/255 (69%), Gaps = 8/255 (3%)
Strand=Plus/Plus
Query 507599 GTCGAGCGCCACCTGCGCGCGGGCGACGCCGTGGTGATGAACCGGCAGCCGTCGCTGCAC 507658
|||||||| ||| | || |||||| | | | | ||||| ||||| |||||||||
Sbjct 1140944 GTCGAGCGACACATTGTCGATGGCGACTACATCATATTCAACCGCCAGCCTTCGCTGCAC 1141003
Query 507659 ATGGGCTCCATGCTCATGCACAAGGTGGTGCCCATGCCCGGGCGCACCATGCGATTCAAC 507718
| || |||||| | |||| ||| | ||||| ||| | || |||||
Sbjct 1141004 AAGGAGTCCATGATGGGTCACAGAGTGAGGGTGATGCCTTACTCGACCTTCCGCCTCAAC 1141063
Query 507719 CTGGCCGTCACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACGTG 507778
||| ||||||| |||| ||||| ||||| || || |||||||||||| |||||||
Sbjct 1141064 CTGTCCGTCACCTCACCCTATAACGCAGACTTCGATGGTGACGAGATGAACTTGCACGTT 1141123
Query 507779 CCCCAGTC---CGAGACGGCGCGCGCCGAGGTGACGCACACCATGAGC-GTGTCGCTCAA 507834
|| ||||| ||||| | ||| | ||||| | | | | || || ||| | |||||
Sbjct 1141124 CCGCAGTCACACGAGA---CACGCTCTGAGGTTATG-AATCTTTGTGCTGTGCCTCTCAA 1141179
Query 507835 GACCGTGTCGCCGCA 507849
| ||| ||||||||
Sbjct 1141180 CATCGTCTCGCCGCA 1141194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107120160993544
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