Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq1 181 2e-39
seq8 136 6e-26
seq21 102 1e-15
seq9 89.7 8e-12
>seq1
Length=3303888
Score = 181 bits (200), Expect = 2e-39
Identities = 241/329 (73%), Gaps = 7/329 (2%)
Strand=Plus/Minus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| ||||| || ||| | |||||| ||| ||||||||||||||| |||||||||
Sbjct 528892 CCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGCCCGCGCTTC 528833
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|| ||||| |||||||| ||| ||| ||||| ||||| |||||||| || || ||
Sbjct 528832 TTCAGCCAGAAGATGGCGGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGCTGCGAAA 528773
Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520
||| ||| || | || ||| ||| | | | || | | |||||||||| | |||||
Sbjct 528772 GCGATGAGACG-GCAGCCGAAG-GTCGATG-CATCGTCGCTGATCCACTTGAGTGCCCAA 528716
Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGG--TGGTCCTTCT 794578
| ||||| || | | |||| | ||||||||||| |||||| || | ||
Sbjct 528715 TTGGCCTTCTTGCGGATGCAGGGGATGTTGTCGATGGCGTTGAAGAGGTATGTGCGTTGG 528656
Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638
||| || || ||| ||||||||||||||| || ||||||||||| ||||||||||| |
Sbjct 528655 CGA--GGTTCACTGATGTAGGTGTCGATGAGTAGTGAGTAGGTCTCGGAGTGGATGTTCT 528598
Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCAG 794667
| || |||||||||||| || ||||||
Sbjct 528597 CCATCATGATCTGGAAGCCGTAGAAGCAG 528569
Score = 170 bits (188), Expect = 3e-36
Identities = 226/308 (73%), Gaps = 7/308 (2%)
Strand=Plus/Minus
Query 794362 TCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAG 794421
|||||| ||| |||||||||||| || ||||||||||||||||| ||||| || |
Sbjct 494504 TCGTTGGAGAAGGTGAGGCCGGGCATCAGCCCGCGCTTCTTGAGCCAGAAGATAGCGGCG 494445
Query 794422 AAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAA 794481
|| || ||||| || ||||||||||| || |||||| | | ||| || | || ||
Sbjct 494444 AACGAACCAGAGAAGAAAATGCCCTCGACAGCTGCAAAGGCAATGAGACG-GCAGCCGAA 494386
Query 794482 GTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAG 794541
| ||| | | | || | | |||||||||| | ||||| | ||||| || | | |
Sbjct 494385 G-GTCGATG-CGTCGTCGCTGATCCACTTTAGTGCCCAGTTGGCCTTCTTGCGGATGCAC 494328
Query 794542 GGCACCGTGTCGATGGCGCGAAAGAGG--TGGTCCTTCTCGACCGGGTCCTTGACGTAGG 794599
|| | ||||||||||| ||||||| || | || ||| || || ||| |||||
Sbjct 494327 GGGATGTTGTCGATGGCGTTAAAGAGGTATGTGCGTTGGCGA--GGTTCGCTGATGTAGG 494270
Query 794600 TGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCAT 794659
|||||||||| || ||||||||||| |||||||| || || || |||||||||||| |
Sbjct 494269 TGTCGATGAGTAGTGAGTAGGTCTCGGAGTGGATATTCTCCATCATGATCTGGAAGCCGT 494210
Query 794660 AAAAGCAG 794667
| ||||||
Sbjct 494209 AGAAGCAG 494202
Score = 149 bits (164), Expect = 1e-29
Identities = 226/317 (71%), Gaps = 6/317 (2%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || |||||| |||||| ||||| |||||||| |||
Sbjct 494848 TGACACCAGCCTTCTGGTAGTCACCTACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGCGA 494789
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| ||||| |||||| | ||| ||||||| | ||||| ||| || ||||
Sbjct 494788 GGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGCCGTGGCCGA 494729
Query 794011 G--CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068
| ||| | || |||||||| |||||||| || ||||||||||||||||| ||||||
Sbjct 494728 GTGCGAGG--AGTAGGCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTT 494671
Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128
|||||||| || || ||| || | || || ||||||| |||||||||||| ||
Sbjct 494670 CATGCCGAGAAGTGCGCAGGGTAGGGCGTCTGAGAGGAACTCTTGCTCGATCTCGACAGC 494611
Query 794129 CTCGATGATGATCTGCCTGGGC-ACGTCGGACGACGGCTTGTCGACGAGCATCGTGTAGA 794187
|| |||||||||| ||| | | |||| || ||||||| | ||| | || |
Sbjct 494610 TTCCGTGATGATCTG-GTGGACAAGGTCGAGTGATGGCTTGTTGCGGAGATGTGCGTGCA 494552
Query 794188 GCAGGCAGGCAAAGTCG 794204
||| ||||| ||||||
Sbjct 494551 GCATACAGGCGAAGTCG 494535
Score = 136 bits (150), Expect = 6e-26
Identities = 223/317 (70%), Gaps = 6/317 (2%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || |||||| |||||| ||||| |||||||| |||
Sbjct 529215 TGACACCGGCCTTCTGGTAGTCACCTACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGCGA 529156
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| ||||| |||||| | ||| ||||||| | ||||| ||| | || |
Sbjct 529155 GGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGCTGTGGCCAA 529096
Query 794011 G--CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068
| ||| | || ||||| || ||||| || || ||||||||||||||||| ||||||
Sbjct 529095 GTGCGAGG--AGTAGGCGATCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTT 529038
Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128
|||||||| || || |||||| | || || ||||||| ||| |||||||| ||
Sbjct 529037 CATGCCGAGAAGTGCGCAGGGCAGGGCGTCCGAGAGGAACTCTTGCTCAATCTCGACAGC 528978
Query 794129 CTCGATGATGATCTGCCTGGGC-ACGTCGGACGACGGCTTGTCGACGAGCATCGTGTAGA 794187
|| |||||||||| ||| | | |||| || ||||||| | ||| | || |
Sbjct 528977 TTCCGTGATGATCTG-GTGGACGAGGTCGAGTGATGGCTTGTTGCGGAGATGTGCGTGCA 528919
Query 794188 GCAGGCAGGCAAAGTCG 794204
||| |||||| ||||||
Sbjct 528918 GCATGCAGGCGAAGTCG 528902
>seq8
Length=1734925
Score = 136 bits (150), Expect = 6e-26
Identities = 108/130 (83%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 2035632 TTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGC 2035691
|| ||| | |||||||| ||||||||| | ||||||||| | || |||||| | ||||||
Sbjct 1455065 TTCGAGATCATCCTCGCTGCCAACTACATGGACATCAAGGCGCTTCTCGATGTTGGGTGC 1455124
Query 2035692 AAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAAC 2035751
|||||||| || ||| | ||||||||||||||||| || || ||||||||||| || |||
Sbjct 1455125 AAGACCGTCGCAAACATGATCAAGGGCAAGTCGCCTGAAGAGATCCGCAAGACGTTCAAC 1455184
Query 2035752 ATCAAGTACG 2035761
||| || |||
Sbjct 1455185 ATCCAGAACG 1455194
Score = 136 bits (150), Expect = 6e-26
Identities = 108/130 (83%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 2035632 TTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGC 2035691
|| ||| | |||||||| ||||||||| | ||||||||| | || |||||| | ||||||
Sbjct 1459477 TTCGAGATCATCCTCGCTGCCAACTACATGGACATCAAGGCTCTGCTCGATGTTGGGTGC 1459536
Query 2035692 AAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAAC 2035751
|||||||| || ||| | ||||||||||||||||| || || ||||||||||| || |||
Sbjct 1459537 AAGACCGTCGCAAACATGATCAAGGGCAAGTCGCCTGAAGAGATCCGCAAGACGTTCAAC 1459596
Query 2035752 ATCAAGTACG 2035761
||| || |||
Sbjct 1459597 ATCCAGAACG 1459606
>seq21
Length=734177
Score = 102 bits (112), Expect = 1e-15
Identities = 122/163 (75%), Gaps = 2/163 (1%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||| ||||| || ||||||||| |||| || || ||| | |
Sbjct 488220 GTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCGAGCTCACCGGGAAG 488279
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||| |||||||||| |||||||| ||||| | | ||| ||| |||||| || |
Sbjct 488280 GATGAGGCGCACGGAAGTCTGGATTTCGCGCGAGGAGATGGTGGACTTCTTGTT-GTAGG 488338
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTC 1485632
| || || | |||||| || ||| ||| |||| |||||
Sbjct 488339 CGGCGAGCTTGGAGGCCTCTGTTGCGACGCGCTCGAAGATGTC 488381
Score = 102 bits (112), Expect = 1e-15
Identities = 122/163 (75%), Gaps = 2/163 (1%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||| ||||| || ||||||||| |||| || || ||| | |
Sbjct 511289 GTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCGAGCTCACCGGGGAG 511348
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||| |||||||||| |||||||| ||||| | | ||| ||| |||||| || |
Sbjct 511349 GATGAGGCGCACGGAAGTCTGGATTTCGCGCGAGGAGATGGTGGACTTCTTGTT-GTAGG 511407
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTC 1485632
| || || | |||||| || ||| ||| |||| |||||
Sbjct 511408 CGGCGAGCTTGGAGGCCTCTGTTGCGACGCGCTCGAAGATGTC 511450
>seq9
Length=1716618
Score = 89.7 bits (98), Expect = 8e-12
Identities = 141/198 (71%), Gaps = 3/198 (2%)
Strand=Plus/Plus
Query 429520 GGTG-GACCGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAACCGGCAGCCG 429578
|||| || ||||||||| ||| | | |||||| | | | | ||||| |||||
Sbjct 1140935 GGTGCGATCGTCGAGCGACACATTGTCGATGGCGACTACATCATATTCAACCGCCAGCCT 1140994
Query 429579 TCGCTCCACATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCCGG-TCGCACCTT 429637
||||| |||| || ||| ||| | |||| ||| | ||||| ||| |||||
Sbjct 1140995 TCGCTGCACAAGGAGTCCATGATGGGTCACAGAGTGAGGGTGATGCCTTACTCG-ACCTT 1141053
Query 429638 CCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGAA 429697
||| ||||||||| |||| || |||| ||||| ||||| || || |||||||||||
Sbjct 1141054 CCGCCTCAACCTGTCCGTCACCTCACCCTATAACGCAGACTTCGATGGTGACGAGATGAA 1141113
Query 429698 CCTGCACGTGCCCCAGTC 429715
| ||||||| || |||||
Sbjct 1141114 CTTGCACGTTCCGCAGTC 1141131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916221721101848
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |