Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 4e-18
>seq2
Length=2712501
Score = 107 bits (118), Expect = 4e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| | || ||| || || |||||||| || || || ||||| || || |||||
Sbjct 1305853 CCTCCACGCAGACGTAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTC 1305794
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | || ||||| || | || || ||||| ||||| || | || || ||||| ||
Sbjct 1305793 AAGGTCCTGCCGTCCTCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 1305734
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || |||||||| |||||||| | || || || || ||||| || | ||| ||
Sbjct 1305733 ATACCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACC 1305674
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||||||||| | ||||| || || || |||||
Sbjct 1305673 TCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATTTGCAT 1305627
Score = 107 bits (118), Expect = 4e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| | || ||| || || |||||||| || || || ||||| || || |||||
Sbjct 1361980 CCTCCACGCAGACGTAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTC 1361921
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | || ||||| || | || || ||||| ||||| || | || || ||||| ||
Sbjct 1361920 AAGGTCCTGCCGTCCTCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 1361861
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || |||||||| |||||||| | || || || || ||||| || | ||| ||
Sbjct 1361860 ATACCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACC 1361801
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||||||||| | ||||| || || || |||||
Sbjct 1361800 TCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATTTGCAT 1361754
Score = 107 bits (118), Expect = 4e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| | || ||| || || |||||||| || || || ||||| || || |||||
Sbjct 1459505 CCTCCACGCAGACGTAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTC 1459446
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | || ||||| || | || || ||||| ||||| || | || || ||||| ||
Sbjct 1459445 AAGGTCCTGCCGTCCTCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 1459386
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || |||||||| |||||||| | || || || || ||||| || | ||| ||
Sbjct 1459385 ATACCCTCCTTATCCTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGATTCCACC 1459326
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||||||||| | ||||| || || || |||||
Sbjct 1459325 TCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATTTGCAT 1459279
Score = 89.7 bits (98), Expect = 1e-12
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| | | |||||| || |||||||| || || || ||||| || || || ||
Sbjct 1333685 CCTCCACGTAGACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 1333626
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | | || || || | || || ||||| ||||| || | || || ||||| ||
Sbjct 1333625 AACGTCCGGCCATCCTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGGTCTGGTGGG 1333566
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| || || ||||| | || || || || ||||| || | ||||||
Sbjct 1333565 ATACCCTCCTTGTCCTGGATCTTCGACTTCACGTTGTCGATCGTGTCGGATGATTCTACC 1333506
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||||||||| | ||||| || || || |||||
Sbjct 1333505 TCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAGATTTGCAT 1333459
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981824281518648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |