Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq2 91.5 1e-13
>seq2
Length=2712501
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| || | || ||||| |||||| || || || ||| || || ||||||||||||
Sbjct 1305853 CCTCCACGCAGACGTAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTC 1305794
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
| || | |||| ||||| || || || || || || | ||||||||| ||| | ||
Sbjct 1305793 AAGGTCCTGCCGTCCTCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 1305734
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||| || || || ||| ||| ||| || | ||| | ||||| |||||||||
Sbjct 1305733 ATACCCTCCTTATCCTGAATCTTCGACTTC-ACGTTGTCGATCGTGTCTGATGATTCCAC 1305675
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | |||||| || || ||||| | || || || || || ||||||
Sbjct 1305674 CTCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATTTGCATA 1305626
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| || | || ||||| |||||| || || || ||| || || ||||||||||||
Sbjct 1361980 CCTCCACGCAGACGTAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTC 1361921
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
| || | |||| ||||| || || || || || || | ||||||||| ||| | ||
Sbjct 1361920 AAGGTCCTGCCGTCCTCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 1361861
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||| || || || ||| ||| ||| || | ||| | ||||| |||||||||
Sbjct 1361860 ATACCCTCCTTATCCTGAATCTTCGACTTC-ACGTTGTCGATCGTGTCTGATGATTCCAC 1361802
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | |||||| || || ||||| | || || || || || ||||||
Sbjct 1361801 CTCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATTTGCATA 1361753
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| || | || ||||| |||||| || || || ||| || || ||||||||||||
Sbjct 1459505 CCTCCACGCAGACGTAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTC 1459446
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
| || | |||| ||||| || || || || || || | ||||||||| ||| | ||
Sbjct 1459445 AAGGTCCTGCCGTCCTCCAACTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 1459386
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||| || || || ||| ||| ||| || | ||| | ||||| |||||||||
Sbjct 1459385 ATACCCTCCTTATCCTGAATCTTCGACTTC-ACGTTGTCGATCGTGTCTGATGATTCCAC 1459327
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | |||||| || || ||||| | || || || || || ||||||
Sbjct 1459326 CTCGAGCGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATTTGCATA 1459278
Score = 84.2 bits (92), Expect = 1e-11
Identities = 143/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606
|| ||||| ||| || || |||||||| ||||| || ||||| |||| || | |||
Sbjct 1305601 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGTTGC 1305542
Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666
|| ||||| ||||| | ||||| || ||| | || | || || ||||| || |||
Sbjct 1305541 TTGCCGGCGAAAATGAGGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTC 1305482
Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725
|| | ||| ||| | ||||||| || || || || | ||||| || || || ||
Sbjct 1305481 GACTTGA-CATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 1305423
Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750
| || || || ||||||||||||
Sbjct 1305422 GAGGGTCTTGACGAAGATCTGCATA 1305398
Score = 84.2 bits (92), Expect = 1e-11
Identities = 143/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606
|| ||||| ||| || || |||||||| ||||| || ||||| |||| || | |||
Sbjct 1361728 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGTTGC 1361669
Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666
|| ||||| ||||| | ||||| || ||| | || | || || ||||| || |||
Sbjct 1361668 TTGCCGGCGAAAATGAGGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTC 1361609
Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725
|| | ||| ||| | ||||||| || || || || | ||||| || || || ||
Sbjct 1361608 GACTTGA-CATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 1361550
Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750
| || || || ||||||||||||
Sbjct 1361549 GAGGGTCTTGACGAAGATCTGCATA 1361525
Score = 84.2 bits (92), Expect = 1e-11
Identities = 143/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606
|| ||||| ||| || || |||||||| ||||| || ||||| |||| || | |||
Sbjct 1459253 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGTTGC 1459194
Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666
|| ||||| ||||| | ||||| || ||| | || | || || ||||| || |||
Sbjct 1459193 TTGCCGGCGAAAATGAGGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTC 1459134
Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725
|| | ||| ||| | ||||||| || || || || | ||||| || || || ||
Sbjct 1459133 GACTTGA-CATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 1459075
Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750
| || || || ||||||||||||
Sbjct 1459074 GAGGGTCTTGACGAAGATCTGCATA 1459050
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703070589440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |