Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq2 104 6e-17
>seq2
Length=2712501
Score = 104 bits (114), Expect = 6e-17
Identities = 137/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || |||||||| || || ||||| | || |||||| || ||||| ||||
Sbjct 1305641 CAAGACTCTCACAGGCAAGACCATCACGCTCGAGGTGGAATCATCAGACACGATCGACAA 1305700
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| |||||||| || || || || || || ||| || | || |||||
Sbjct 1305701 CGTGAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCAGACCAGCAGCGTCTCATCTT 1305760
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || ||||||||||| || || ||||| ||| |||||||||| ||||||| |||||
Sbjct 1305761 CGCTGGGAAGCAGTTGGAGGACGGCAGGACCTTGAGCGATTACAACATCCAGAAGGAGTC 1305820
Query 206364 TACTCTTCAC 206373
|| || |||
Sbjct 1305821 GACGCTGCAC 1305830
Score = 104 bits (114), Expect = 6e-17
Identities = 137/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || |||||||| || || ||||| | || |||||| || ||||| ||||
Sbjct 1361768 CAAGACTCTCACAGGCAAGACCATCACGCTCGAGGTGGAATCATCAGACACGATCGACAA 1361827
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| |||||||| || || || || || || ||| || | || |||||
Sbjct 1361828 CGTGAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCAGACCAGCAGCGTCTCATCTT 1361887
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || ||||||||||| || || ||||| ||| |||||||||| ||||||| |||||
Sbjct 1361888 CGCTGGGAAGCAGTTGGAGGACGGCAGGACCTTGAGCGATTACAACATCCAGAAGGAGTC 1361947
Query 206364 TACTCTTCAC 206373
|| || |||
Sbjct 1361948 GACGCTGCAC 1361957
Score = 104 bits (114), Expect = 6e-17
Identities = 137/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || |||||||| || || ||||| | || |||||| || ||||| ||||
Sbjct 1459293 CAAGACTCTCACAGGCAAGACCATCACGCTCGAGGTGGAATCATCAGACACGATCGACAA 1459352
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| |||||||| || || || || || || ||| || | || |||||
Sbjct 1459353 CGTGAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCAGACCAGCAGCGTCTCATCTT 1459412
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || ||||||||||| || || ||||| ||| |||||||||| ||||||| |||||
Sbjct 1459413 CGCTGGGAAGCAGTTGGAGGACGGCAGGACCTTGAGCGATTACAACATCCAGAAGGAGTC 1459472
Query 206364 TACTCTTCAC 206373
|| || |||
Sbjct 1459473 GACGCTGCAC 1459482
Score = 95.1 bits (104), Expect = 3e-14
Identities = 135/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || |||||||| || || ||||| | || || ||| || ||||| ||||
Sbjct 1333473 CAAGACTCTCACAGGCAAGACCATCACGCTCGAGGTAGAATCATCCGACACGATCGACAA 1333532
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||| || || || || || || || ||| || | ||||||||
Sbjct 1333533 CGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAGCAGCGTCTTATCTT 1333592
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || ||||||||||| ||||| |||| ||| ||| |||||| ||||||| |||||
Sbjct 1333593 CGCTGGTAAGCAGTTGGAGGATGGCCGGACGTTGAGCGACTACAACATCCAGAAGGAGTC 1333652
Query 206364 TACTCTTCAC 206373
|| || |||
Sbjct 1333653 GACGCTGCAC 1333662
Score = 86.0 bits (94), Expect = 1e-11
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| | || || || || ||||| | || ||||| || || ||||| ||||
Sbjct 1305185 CAAAACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATCGACAA 1305244
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||| ||||| || || || ||| || ||| || | | |||||
Sbjct 1305245 TGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCTTGATCTT 1305304
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|||||| |||||| | || ||||| | || | |||| |||||| ||||||| |||||
Sbjct 1305305 CGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTC 1305364
Query 206364 TACTCTTCACCTTGT 206378
|| ||||| || ||
Sbjct 1305365 CACCCTTCATCTCGT 1305379
Score = 86.0 bits (94), Expect = 1e-11
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| | || || || || ||||| | || ||||| || || ||||| ||||
Sbjct 1361312 CAAAACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATCGACAA 1361371
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||| ||||| || || || ||| || ||| || | | |||||
Sbjct 1361372 TGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCTTGATCTT 1361431
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|||||| |||||| | || ||||| | || | |||| |||||| ||||||| |||||
Sbjct 1361432 CGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTC 1361491
Query 206364 TACTCTTCACCTTGT 206378
|| ||||| || ||
Sbjct 1361492 CACCCTTCATCTCGT 1361506
Score = 86.0 bits (94), Expect = 1e-11
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| | || || || || ||||| | || ||||| || || ||||| ||||
Sbjct 1458837 CAAAACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATCGACAA 1458896
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||| ||||| || || || ||| || ||| || | | |||||
Sbjct 1458897 TGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCTTGATCTT 1458956
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|||||| |||||| | || ||||| | || | |||| |||||| ||||||| |||||
Sbjct 1458957 CGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTC 1459016
Query 206364 TACTCTTCACCTTGT 206378
|| ||||| || ||
Sbjct 1459017 CACCCTTCATCTCGT 1459031
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181817287037672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |