Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045. 2_202017-04-03] 232 sequences; 44,765,267 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2 104 6e-17 >seq2 Length=2712501 Score = 104 bits (114), Expect = 6e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || |||||||| || || ||||| | || |||||| || ||||| |||| Sbjct 1305641 CAAGACTCTCACAGGCAAGACCATCACGCTCGAGGTGGAATCATCAGACACGATCGACAA 1305700 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| |||||||| || || || || || || ||| || | || ||||| Sbjct 1305701 CGTGAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCAGACCAGCAGCGTCTCATCTT 1305760 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || ||||||||||| || || ||||| ||| |||||||||| ||||||| ||||| Sbjct 1305761 CGCTGGGAAGCAGTTGGAGGACGGCAGGACCTTGAGCGATTACAACATCCAGAAGGAGTC 1305820 Query 206364 TACTCTTCAC 206373 || || ||| Sbjct 1305821 GACGCTGCAC 1305830 Score = 104 bits (114), Expect = 6e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || |||||||| || || ||||| | || |||||| || ||||| |||| Sbjct 1361768 CAAGACTCTCACAGGCAAGACCATCACGCTCGAGGTGGAATCATCAGACACGATCGACAA 1361827 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| |||||||| || || || || || || ||| || | || ||||| Sbjct 1361828 CGTGAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCAGACCAGCAGCGTCTCATCTT 1361887 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || ||||||||||| || || ||||| ||| |||||||||| ||||||| ||||| Sbjct 1361888 CGCTGGGAAGCAGTTGGAGGACGGCAGGACCTTGAGCGATTACAACATCCAGAAGGAGTC 1361947 Query 206364 TACTCTTCAC 206373 || || ||| Sbjct 1361948 GACGCTGCAC 1361957 Score = 104 bits (114), Expect = 6e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || |||||||| || || ||||| | || |||||| || ||||| |||| Sbjct 1459293 CAAGACTCTCACAGGCAAGACCATCACGCTCGAGGTGGAATCATCAGACACGATCGACAA 1459352 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| |||||||| || || || || || || ||| || | || ||||| Sbjct 1459353 CGTGAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCAGACCAGCAGCGTCTCATCTT 1459412 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || ||||||||||| || || ||||| ||| |||||||||| ||||||| ||||| Sbjct 1459413 CGCTGGGAAGCAGTTGGAGGACGGCAGGACCTTGAGCGATTACAACATCCAGAAGGAGTC 1459472 Query 206364 TACTCTTCAC 206373 || || ||| Sbjct 1459473 GACGCTGCAC 1459482 Score = 95.1 bits (104), Expect = 3e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || |||||||| || || ||||| | || || ||| || ||||| |||| Sbjct 1333473 CAAGACTCTCACAGGCAAGACCATCACGCTCGAGGTAGAATCATCCGACACGATCGACAA 1333532 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| || || || || || || || ||| || | |||||||| Sbjct 1333533 CGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAGCAGCGTCTTATCTT 1333592 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || ||||||||||| ||||| |||| ||| ||| |||||| ||||||| ||||| Sbjct 1333593 CGCTGGTAAGCAGTTGGAGGATGGCCGGACGTTGAGCGACTACAACATCCAGAAGGAGTC 1333652 Query 206364 TACTCTTCAC 206373 || || ||| Sbjct 1333653 GACGCTGCAC 1333662 Score = 86.0 bits (94), Expect = 1e-11 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || || || ||||| | || ||||| || || ||||| |||| Sbjct 1305185 CAAAACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATCGACAA 1305244 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| ||||| || || || ||| || ||| || | | ||||| Sbjct 1305245 TGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCTTGATCTT 1305304 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | || ||||| | || | |||| |||||| ||||||| ||||| Sbjct 1305305 CGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTC 1305364 Query 206364 TACTCTTCACCTTGT 206378 || ||||| || || Sbjct 1305365 CACCCTTCATCTCGT 1305379 Score = 86.0 bits (94), Expect = 1e-11 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || || || ||||| | || ||||| || || ||||| |||| Sbjct 1361312 CAAAACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATCGACAA 1361371 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| ||||| || || || ||| || ||| || | | ||||| Sbjct 1361372 TGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCTTGATCTT 1361431 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | || ||||| | || | |||| |||||| ||||||| ||||| Sbjct 1361432 CGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTC 1361491 Query 206364 TACTCTTCACCTTGT 206378 || ||||| || || Sbjct 1361492 CACCCTTCATCTCGT 1361506 Score = 86.0 bits (94), Expect = 1e-11 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || || || ||||| | || ||||| || || ||||| |||| Sbjct 1458837 CAAAACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATCGACAA 1458896 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| ||||| || || || ||| || ||| || | | ||||| Sbjct 1458897 TGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCTTGATCTT 1458956 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | || ||||| | || | |||| |||||| ||||||| ||||| Sbjct 1458957 CGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTC 1459016 Query 206364 TACTCTTCACCTTGT 206378 || ||||| || || Sbjct 1459017 CACCCTTCATCTCGT 1459031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181817287037672