Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq1 219 6e-51
seq19 109 8e-18
seq21 87.8 3e-11
>seq1
Length=3303888
Score = 219 bits (242), Expect = 6e-51
Identities = 363/510 (71%), Gaps = 18/510 (4%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||||||| | |||||| || ||||| ||||| || || ||||| || |||||| ||||||
Sbjct 528356 GATATGGCAGATGTAC-AAGAAGGCAGAGGCATCATTCTGGACAGCAGAGGAGATCGACC 528414
Query 1455835 TCGGCGCCGACACGGTCC-ACTGG-----GTGTCGCTGAGCGACGACGAGCGCCATTTCA 1455888
| | || | | | | ||||| | ||| | | ||| |||||||| ||||
Sbjct 528415 T-GTCGAAGGATCTGCACGACTGGAACAAGCGTCTC--AACGATGACGAGCGATTCTTCA 528471
Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948
| || || || ||||| || |||||| || ||||| || ||||||||||| |
Sbjct 528472 TTTCACATGTGCTTGCCTTCTT-CGCCGCATCAGACGGCATTGTCAACGAGAACCTGGTC 528530
Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008
| ||||| | ||||||||| | || || || || | || ||||| |||||||||
Sbjct 528531 GAGCGCTTCAGTGGTGAGGTCCAAATACCCGACGCTCGCTGCTTCTACGGCTTCCAGATC 528590
Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068
|| || ||||||||||| || |||||||| || || |||||||||||| ||| ||
Sbjct 528591 ATGATGGAGAACATCCACTCCGAGACCTACTCACTACTCATCGACACCTACATCAGTGAA 528650
Query 1456069 CCGGTCGAGAA-GGAC-CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAA 1456126
|| ||| || | || ||||||| ||||||||||| | || | | | || |
Sbjct 528651 CC--TCGCCAACGCACATACCTCTTCAACGCCATCGACAACATCCCCTGCATCCGCAAGA 528708
Query 1456127 AGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCT 1456186
||||| | ||||| | |||||||||| | | || || ||||| ||| | | || ||
Sbjct 528709 AGGCCAATTGGGCACTCAAGTGGATCAGCGACGA-TGCATCGAC-CTTCGGCTGCCGTCT 528766
Query 1456187 CGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTG 1456245
| ||| || || || |||||||| ||||| ||||| ||| ||| ||||||||| ||
Sbjct 528767 CATCGCTTTCGCAGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCGCCATCTTCTG 528826
Query 1456246 GCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
||| ||||||||||| ||||||||||| ||
Sbjct 528827 GCTGAAGAAGCGCGGGCTCATGCCCGGCCT 528856
Score = 210 bits (232), Expect = 3e-48
Identities = 361/510 (71%), Gaps = 18/510 (4%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||||||| | |||||| || ||||| ||||| || || ||||| || |||||| | || |
Sbjct 493989 GATATGGCAGATGTAC-AAGAAGGCAGAGGCATCATTCTGGACAGCAGAGGAGATTGATC 494047
Query 1455835 TCGGCGCC-GACACGGTCCACTGG-----GTGTCGCTGAGCGACGACGAGCGCCATTTCA 1455888
| | || || | | ||||| | ||| | | || |||||||| ||||
Sbjct 494048 T-GTCGAAAGATCTGCACGACTGGAACAAGCGTCTC--AATGATGACGAGCGATTCTTCA 494104
Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948
| || || || ||||| || |||||| || |||||||| ||||||||||| |
Sbjct 494105 TTTCACATGTGCTTGCCTTCTT-CGCCGCATCAGACGGCATCGTCAACGAGAACCTGGTC 494163
Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008
| || || | ||||| ||| | || ||||| || | || ||||| |||||||||
Sbjct 494164 GAGCGATTCAGTGGCGAGGTGCAAATCCCTGAGGCTCGCTGCTTCTACGGCTTCCAGATC 494223
Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068
|| || || |||||||| || |||||||| || || |||||||||||| ||| ||
Sbjct 494224 ATGATGGAGAATATCCACTCCGAGACCTACTCACTACTCATCGACACCTACATCAGCGAA 494283
Query 1456069 CCGGTCGAGAA-GGAC-CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAA 1456126
|| ||| || | || |||||||| ||||||||||| | |||| | | || |
Sbjct 494284 CC--TCGCCAACGCACATACCTCTTTAACGCCATCGACAACATCCCGTGCATCCGCAAGA 494341
Query 1456127 AGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCT 1456186
||||| ||||||| | |||||||||| | | || || ||||| ||| | | || ||
Sbjct 494342 AGGCCAACTGGGCACTAAAGTGGATCAGCGACGA-CGCATCGAC-CTTCGGCTGCCGTCT 494399
Query 1456187 CGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTG 1456245
| | | |||||| || ||||||||||| || ||||| || ||| ||| ||||| ||
Sbjct 494400 CATTGCCTTTGCAGCTGTCGAGGGCATTTTCTTCTCTGGTTCGTTCGCCGCTATCTTCTG 494459
Query 1456246 GCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
||||||||||||||| || |||||||| ||
Sbjct 494460 GCTCAAGAAGCGCGGGCTGATGCCCGGCCT 494489
Score = 147 bits (162), Expect = 3e-29
Identities = 230/324 (71%), Gaps = 4/324 (1%)
Strand=Plus/Plus
Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGACG 1456511
||||| ||||| |||||| |||| || | ||| ||||||||| || ||||
Sbjct 494528 TGCACACCGACTTCGCCTGTATGCTGCACGCACATCTCCGCAACAAGCCATCACTCGACC 494587
Query 1456512 TGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGC 1456571
| | | ||||||||| || || |||||||||||| ||||||| || || | |
Sbjct 494588 TTGTCCACCAGATCATCACGGAAGCTGTCGAGATCGAGCAAGAGTTCCTCTCAGACGCCC 494647
Query 1456572 TGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGT 1456631
| || || || ||||||||||||||| |||||||||||||||||| | | || ||
Sbjct 494648 TACCCTGCGCACTTCTCGGCATGAACGCCA-AGCTCATGTGCCAGTACATCG-AGTTCGT 494705
Query 1456632 CGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGT 1456691
||| |||||||| ||| || |||||| ||| ||| ||||| | ||||||| |
Sbjct 494706 CGCTGACCGCCTACTCCTCGCACTCGGCCACGG-CAAGTACTACAACGCCACCAACCCCT 494764
Query 1456692 TCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-G 1456750
|| | |||||| ||||| |||| |||||||| ||||| |||||| ||||| |
Sbjct 494765 TCGACTTCATGGAGAACATCTCCCTCGCCGGCAAGACGAACTTCTTCGAGAAGCGCGTAG 494824
Query 1456751 GCGAGTACGCCAAGGCCGGCGTCA 1456774
| || ||| ||||| || ||||
Sbjct 494825 GTGACTACCAGAAGGCTGGTGTCA 494848
Score = 138 bits (152), Expect = 2e-26
Identities = 228/324 (70%), Gaps = 4/324 (1%)
Strand=Plus/Plus
Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGACG 1456511
||||| ||||| ||||| |||| || | ||| ||||||||| || ||||
Sbjct 528895 TGCACACCGACTTCGCCTGCATGCTGCACGCACATCTCCGCAACAAGCCATCACTCGACC 528954
Query 1456512 TGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGC 1456571
| | | ||||||||| || || |||||||| ||| ||||||| || || | |
Sbjct 528955 TCGTCCACCAGATCATCACGGAAGCTGTCGAGATTGAGCAAGAGTTCCTCTCGGACGCCC 529014
Query 1456572 TGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGT 1456631
|||| || || ||||||||||||||| |||||||||||||||||| | | |||||
Sbjct 529015 TGCCCTGCGCACTTCTCGGCATGAACGCCA-AGCTCATGTGCCAGTACATCG-AGTTTGT 529072
Query 1456632 CGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGT 1456691
||| || ||||| ||| || || ||| | | ||| ||||| | ||||||| |
Sbjct 529073 CGCTGATCGCCTACTCCTCGCACTTGGCCACAG-CAAGTACTACAACGCCACCAACCCCT 529131
Query 1456692 TCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-G 1456750
|| | |||||| ||||| |||| |||||||| ||||| |||||| ||||| |
Sbjct 529132 TCGACTTCATGGAGAACATCTCCCTCGCCGGCAAGACGAACTTCTTCGAGAAGCGCGTAG 529191
Query 1456751 GCGAGTACGCCAAGGCCGGCGTCA 1456774
| || ||| |||||||| ||||
Sbjct 529192 GTGACTACCAGAAGGCCGGTGTCA 529215
>seq19
Length=770886
Score = 109 bits (120), Expect = 8e-18
Identities = 348/535 (65%), Gaps = 10/535 (2%)
Strand=Plus/Minus
Query 262879 TGGGACTGGGACGCACTGCGGGCGTCGGTTCG-ACAGCATGGCCTGCGCAACTCGTTGCT 262937
||||| ||||| || || |||| ||| ||| | ||||||| | |||||||| ||||
Sbjct 63037 TGGGATTGGGAAGCCCTCAAGGCG-CGGATCGCAGTGCATGGCGTCCGCAACTCTCTGCT 62979
Query 262938 CGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCGA 262997
||| |||| |||||||| || | || ||||||||| |||| || ||| || ||
Sbjct 62978 CGTCGCGCCTATGCCCACAGCAAGCACATCGCAGATCATGGGGTTCAATGAGTGCTTTGA 62919
Query 262998 GGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCAA 263057
| ||| |||||||||||| | || || || || | ||||| || || |||||
Sbjct 62918 GCCGTACACCAGCAACATCTACTCTCGTCGTGTCCTGGCCGGCGAGTTCCAAGTCGTCAA 62859
Query 263058 CCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCGACCG 263117
|| | ||| ||||| | | || | ||||| |||| | || | ||||
Sbjct 62858 CCCCTGGCTGCTCAAGGACCTTGTCGACATGGGCCTCTGGAGCGACAACATGAAGAACCG 62799
Query 263118 GCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGATCT 263177
|||| || | ||||| | ||| || || | | | || ||| |
Sbjct 62798 CATCATCGCAGATGGTGGCTCTATCCAGCGCATTCCC------AATATCCCCGACGAGAT 62745
Query 263178 CAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTGATATGGCGGC 263237
||||| || | ||||| || |||||| | | | || | ||| | ||| | ||
Sbjct 62744 CAAGGAGCTGTATAAGACTGTCTGGGAGATCAGCCAGCGCAACATCATCCAGATGTCAGC 62685
Query 263238 CGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGACCCGAC 263297
||| || | ||| |||| ||| ||||||||| ||| | || | || |||||
Sbjct 62684 CGATCGTGGCGCCTTCATCGATCAGTCCCAGTCGCTAAACATCCACATGAAGGAGCCGAC 62625
Query 263298 GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAGACTGGCAT 263357
| | | |||||||| |||||| | | ||||||| || || |||||||||||
Sbjct 62624 GATGGGCAAGATCACGTCCATGCACTTCACCGGCTGGCGTCTAGGACTTAAGACTGGCAT 62565
Query 263358 GTACTATCTGCGCACCCGGCCCGCTGCCAACG-CCATTCAATTCACCGTCGATCA 263411
|||||| || |||||| | |||| || || |||| || ||||| ||||||||
Sbjct 62564 GTACTACCTCCGCACCATGGCCGC-CTCAGCGCCCATCCAGTTCACTGTCGATCA 62511
>seq21
Length=734177
Score = 87.8 bits (96), Expect = 3e-11
Identities = 110/148 (74%), Gaps = 6/148 (4%)
Strand=Plus/Minus
Query 724998 GACATGATCGACCGCATCGGCACCGAGGCCGGTC---GCCTGGCGCGCTCCAACAAGCGC 725054
||||| |||| ||| ||| || |||||| || || | ||| || |||||||
Sbjct 488381 GACATCTTCGAGCGCGTCGCAACAGAGGCC--TCCAAGCTCGCCGC-CTACAACAAGAAG 488325
Query 725055 AACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTG 725114
||| ||| | ||||||| |||||||| |||||||||| ||| | | ||| || ||
Sbjct 488324 TCCACCATCTCCTCGCGCGAAATCCAGACTTCCGTGCGCCTCATCCTTCCCGGTGAGCTC 488265
Query 725115 GCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|||| ||||||||| |||||||||||||
Sbjct 488264 GCCAAGCACGCCGTGTCCGAGGGCACCA 488237
Score = 87.8 bits (96), Expect = 3e-11
Identities = 110/148 (74%), Gaps = 6/148 (4%)
Strand=Plus/Minus
Query 724998 GACATGATCGACCGCATCGGCACCGAGGCCGGTC---GCCTGGCGCGCTCCAACAAGCGC 725054
||||| |||| ||| ||| || |||||| || || | ||| || |||||||
Sbjct 511450 GACATCTTCGAGCGCGTCGCAACAGAGGCC--TCCAAGCTCGCCGC-CTACAACAAGAAG 511394
Query 725055 AACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTG 725114
||| ||| | ||||||| |||||||| |||||||||| ||| | | ||| || ||
Sbjct 511393 TCCACCATCTCCTCGCGCGAAATCCAGACTTCCGTGCGCCTCATCCTCCCCGGTGAGCTC 511334
Query 725115 GCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|||| ||||||||| |||||||||||||
Sbjct 511333 GCCAAGCACGCCGTGTCCGAGGGCACCA 511306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177788823173584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |