Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045. 2_202017-04-03] 232 sequences; 44,765,267 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1 141 1e-28 >seq1 Length=3303888 Score = 141 bits (156), Expect = 1e-28 Identities = 292/424 (69%), Gaps = 14/424 (3%) Strand=Plus/Minus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| || || |||||||| |||||||| ||||| || | ||| ||||| ||||| Sbjct 529198 TAGTCACCTACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGCGAGGGAGATGTTCTCCATG 529139 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCA--AATGG--GTGGCACCCCAACTTGTTTGAGGAG 122486 ||||| || || || | ||||| | | | | ||||| ||| | ||| || Sbjct 529138 AAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGCTGTGGC----CAAGTGCGAGGAGTAG 529083 Query 122487 ACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTT 122546 ||||| | ||| |||| ||||||| | |||| || | |||||| |||| || Sbjct 529082 GCGATCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGAAGTGC 529023 Query 122547 ACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGC 122606 || || || |||||| ||| |||| ||| ||||||||| || || || | | ||| Sbjct 529022 GCAGGGCAGGGCGTCCGAGAGGAACTCTTGCTCAATCTCGACAGCTTCCGTGATGATCTG 528963 Query 122607 GTGGATAGTTTCG-GTAGTGGGTCTATTACGCAAA-GT-CTTGAAGAGCTCCACGGCAAA 122663 ||||| ||| || ||| | | || || | | || | || || | || ||| || Sbjct 528962 GTGGACGAGGTCGAGTGATGGCT-TGTTGCGGAGATGTGCGTGCAGCA-TGCA-GGCGAA 528906 Query 122664 CTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCAT 122723 || ||| | ||||| || ||||| || || || || |||||| || || ||||| Sbjct 528905 GTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCAT 528846 Query 122724 GAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTC 122783 ||| || |||||||||| ||| | || ||| |||||| || ||||||||||||||||| Sbjct 528845 GAGCCCGCGCTTCTTCAGCCAGAAGATGGCGGCGAATGAGCCAGAGAAGAAGATACCCTC 528786 Query 122784 CACA 122787 ||| Sbjct 528785 GACA 528782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030178707200