Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1 141 1e-28
>seq1
Length=3303888
Score = 141 bits (156), Expect = 1e-28
Identities = 292/424 (69%), Gaps = 14/424 (3%)
Strand=Plus/Minus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| || || |||||||| |||||||| ||||| || | ||| ||||| |||||
Sbjct 529198 TAGTCACCTACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGCGAGGGAGATGTTCTCCATG 529139
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCA--AATGG--GTGGCACCCCAACTTGTTTGAGGAG 122486
||||| || || || | ||||| | | | | ||||| ||| | ||| ||
Sbjct 529138 AAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGCTGTGGC----CAAGTGCGAGGAGTAG 529083
Query 122487 ACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTT 122546
||||| | ||| |||| ||||||| | |||| || | |||||| |||| ||
Sbjct 529082 GCGATCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGAAGTGC 529023
Query 122547 ACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGC 122606
|| || || |||||| ||| |||| ||| ||||||||| || || || | | |||
Sbjct 529022 GCAGGGCAGGGCGTCCGAGAGGAACTCTTGCTCAATCTCGACAGCTTCCGTGATGATCTG 528963
Query 122607 GTGGATAGTTTCG-GTAGTGGGTCTATTACGCAAA-GT-CTTGAAGAGCTCCACGGCAAA 122663
||||| ||| || ||| | | || || | | || | || || | || ||| ||
Sbjct 528962 GTGGACGAGGTCGAGTGATGGCT-TGTTGCGGAGATGTGCGTGCAGCA-TGCA-GGCGAA 528906
Query 122664 CTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCAT 122723
|| ||| | ||||| || ||||| || || || || |||||| || || |||||
Sbjct 528905 GTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCAT 528846
Query 122724 GAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTC 122783
||| || |||||||||| ||| | || ||| |||||| || |||||||||||||||||
Sbjct 528845 GAGCCCGCGCTTCTTCAGCCAGAAGATGGCGGCGAATGAGCCAGAGAAGAAGATACCCTC 528786
Query 122784 CACA 122787
|||
Sbjct 528785 GACA 528782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628030178707200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |