Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq1 178 2e-39
>seq1
Length=3303888
Score = 178 bits (196), Expect = 2e-39
Identities = 449/665 (68%), Gaps = 22/665 (3%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| || || ||||||||||||||||| ||||| ||| | | | ||| ||||||||
Sbjct 529198 TAGTCACCTACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGCGAGGGAGATGTTCTCCATG 529139
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCA--AATTGCTGGCACTCCAATCTGTTTGAGGAGA- 129844
|| || || ||||| | | ||| | | |||||| | ||| || ||||||
Sbjct 529138 AAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGCTGTGGC--CAA---GTGCGAGGAGTA 529084
Query 129845 --CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGT 129902
||||| | ||| |||| ||||||| |||| || || |||||| |||| ||
Sbjct 529083 GGCGATCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGAAGTG 529024
Query 129903 TACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGG 129962
|| || || |||||| ||| |||| | | |||||| || ||||||||| | |||
Sbjct 529023 CGCAGGGCAGGGCGTCCGAGAGGAACTCTTGCTCAATCTCGACAGCTTCCGTGATGATCT 528964
Query 129963 CGTGAATGGTCTCC-GTGCCAGGTCTATTGCGCAAA-GT-CTTGAAGAGTTCCACGGCAA 130019
||| | | || ||| | | | ||||| | | || | || || | | ||| |
Sbjct 528963 GGTGGACGAGGTCGAGTGATGGCT-TGTTGCGGAGATGTGCGTGCAGCATGCA--GGCGA 528907
Query 130020 ACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCA 130079
| || ||| | |||||||||||||||||||| || || |||||| || || ||||
Sbjct 528906 AGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCA 528847
Query 130080 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCT 130139
|||| || |||||||||| |||||| || || |||||||||||||||||||| ||||
Sbjct 528846 TGAGCCCGCGCTTCTTCAGCCAGAAGATGGCGGCGAATGAGCCAGAGAAGAAGATACCCT 528787
Query 130140 CCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC-AAACCAC 130198
| ||| ||||| || | |||||| |||| | | || | | || | | ||||
Sbjct 528786 CGACAGCTGCGAAAGCGATGAGACG-GCAGCCGAAGGTCGATGCATCGTCGCTGATCCAC 528728
Query 130199 TTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGA-G 130257
|| | ||||| | ||||| || ||| || |||| | | | ||| || | |||| |
Sbjct 528727 TTGAGTGCCCAATTGGCCTTCTTGCGGATGCAGGGGATGTTGTCGATGGCGTTGAAGAGG 528668
Query 130258 TTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCC 130317
| | | || || || || ||||||| | || |||||| ||| || || |||
Sbjct 528667 TATGTGCGTTGGCGA-GGTTCACTGATGTAGGTGTCGATGAGTAGTGAGTAGGTCTCGGA 528609
Query 130318 ATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTA 130376
|||| | | ||| || | ||| | ||||||| |||| || ||| ||| || |
Sbjct 528608 GTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGAGCGTCGGGTATTTGGA 528550
Query 130377 CCTCA 130381
|||||
Sbjct 528549 CCTCA 528545
Score = 141 bits (156), Expect = 1e-28
Identities = 363/539 (67%), Gaps = 18/539 (3%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| || || ||||||||||||||||| ||||| ||| | | | ||| ||||||||
Sbjct 494831 TAGTCACCTACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGCGAGGGAGATGTTCTCCATG 494772
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCA--AATTGC--TGGCACTCCAATCTGTTTGAGGAG 129843
|| || || ||||| | | ||| | | |||| |||| | | | | ||| ||
Sbjct 494771 AAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGCCGTGGC---CGAGTGCGAG-GAGTAG 494716
Query 129844 ACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTT 129903
|| || | |||| |||| ||||||| |||| || || |||||| |||| ||
Sbjct 494715 GCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGAAGTGC 494656
Query 129904 ACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGC 129963
|| || || ||||| ||| |||| | | ||| || || ||||||||| | |||
Sbjct 494655 GCAGGGTAGGGCGTCTGAGAGGAACTCTTGCTCGATCTCGACAGCTTCCGTGATGATCTG 494596
Query 129964 GTGAAT--GGTCTCCGTGCCAGGTCTATTGCGCAAA-GT-CTTGAAGAGTTCCACGGCAA 130019
||| | |||| ||| | | | ||||| | | || | || || | | ||| |
Sbjct 494595 GTGGACAAGGTCGA-GTGATGGCT-TGTTGCGGAGATGTGCGTGCAGCATACA--GGCGA 494540
Query 130020 ACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCA 130079
| || ||| | |||||||||||||| ||||| || || |||||| || || ||||
Sbjct 494539 AGTCGGTGTGCATGCCCTCGTCACGGGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGGCA 494480
Query 130080 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCT 130139
| || || |||||||| | |||||| || || || || ||||||||||| || ||||
Sbjct 494479 TCAGCCCGCGCTTCTTGAGCCAGAAGATAGCGGCGAACGAACCAGAGAAGAAAATGCCCT 494420
Query 130140 CCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC-AAACCAC 130198
| ||| || || |||| |||||| |||| | | || | | || | | ||||
Sbjct 494419 CGACAGCTGCAAAGGCAATGAGACG-GCAGCCGAAGGTCGATGCGTCGTCGCTGATCCAC 494361
Query 130199 TTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 130257
|| | ||||| | ||||| || ||| ||||||| | | | ||| || | ||||||
Sbjct 494360 TTTAGTGCCCAGTTGGCCTTCTTGCGGATGCACGGGATGTTGTCGATGGCGTTAAAGAG 494302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618433406537920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |