Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045. 2_202017-04-03] 232 sequences; 44,765,267 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq6 107 2e-18 >seq6 Length=1760288 Score = 107 bits (118), Expect = 2e-18 Identities = 293/449 (65%), Gaps = 0/449 (0%) Strand=Plus/Minus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 || || ||||| || || || || || || || | ||| ||||||| ||| ||| | | Sbjct 173851 CCTGTACCGATGCCGTCGGCGCCGTTGATGAGGACCATGGGCACGATCGGAGAGTACATC 173792 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 ||||| || | | |||||||| ||| |||| | | | || | ||| || | Sbjct 173791 TCAGGTTCAATTGTCTTGCCGTCGTCTGTGTTGTACGTCAAGAGAGCCTCGTCGGTCTGG 173732 Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331 | || ||| | | | || | ||||| ||| | ||||| || | || |||||| Sbjct 173731 TGAAAGATGCGCCGCGCGAAGGGCGACAGGCGGGTGTAGATGTATCGGGCACTCGCAGCA 173672 Query 117332 TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTG 117391 || || ||||| ||||| | |||||| | ||||| ||||||| ||| | ||| Sbjct 173671 TCGTTACCACCCTGGAGACGGGAACCGAAGTTGCCACTAGGCTCCAGACAGTTGATGTTA 173612 Query 117392 TTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCA 117451 || | || || ||| | || || | ||| ||||| || | || ||||||| Sbjct 173611 TTCGATCCGACGAAGGTCTGCGCTAGACCGACGATCGTCTGCTGCATTGACGTCTCACCA 173552 Query 117452 TGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGAC 117511 | || || ||| | | | || |||| |||| || | ||||| |||||| | Sbjct 173551 TATGCGTAGGCTGTCAGACCGGAGACTGAGCCAGCCAACTCCACAACCTTGATGTCTTTC 173492 Query 117512 GTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATCC 117571 ||| ||| || ||||| || | |||||| |||||||| |||||||| ||||| Sbjct 173491 TTCAAGTTGCGGCGGAAGCAGGTGTACAGCACCTTCCGCTGACTGGGCTTCAGTCCATCG 173432 Query 117572 GCCACGTGAGGGATCGAACGCTTGATGTC 117600 |||| ||||||||||||| | |||| Sbjct 173431 ACCACAGATGGGATCGAACGCTGGTTGTC 173403 Score = 96.9 bits (106), Expect = 4e-15 Identities = 292/446 (65%), Gaps = 4/446 (1%) Strand=Plus/Minus Query 151874 ATCCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAA 151933 |||| ||||||||||| || ||||| |||| || | ||| ||||| || || | ||| | Sbjct 199857 ATCCTGTACCGATGCCGTCGGCACCATTGATGAGGACCATGGGCACGATCGGAGAGTACA 199798 Query 151934 ACTCCGGCTCCA-CCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCC 151992 ||| ||||| | | | ||| |||||||| | ||| |||| | | | ||||| | Sbjct 199797 TCTCAGGCTCGATCGTCTTG-CCGTCATCGGTGTTGTACGTCAAGAGAGCCTCGTCAGTC 199739 Query 151993 GGATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCC 152052 | | ||| || || || | | || | || ||| ||||||| || | |||||| Sbjct 199738 TGGTGGAAAATGCGACGGGCGAAGGGTGAGAGGCGAGTGTAGATGTAACGTGCGCTGGCA 199679 Query 152053 GCATCCTTGCC-ACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAG 152111 ||||| || || ||||| || || | || || | || |||||||| ||||| Sbjct 199678 GCATCGTTACCTCCCTGCAAG-CGGGAACCGAAATTGCCGCTAGGCTCGAGACAGTTGAT 199620 Query 152112 GTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTC 152171 |||||||| |||||||| | || || | | ||||| || ||||| || || Sbjct 199619 GTTGTTGGATCCCACGAAGGTTTGGGCGAGACCGACAATTGTCTGCTGCATTGACGTCTC 199560 Query 152172 ACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTC 152231 || | || || ||| || | | || |||| || | || | ||||| ||||| Sbjct 199559 GCCATATGCGTAGGCTGTCAGCCCAGAGACTGATCCAGCAAGCTCGACAACCTTGATGTC 199500 Query 152232 CGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACC 152291 | || ||| ||| | || |||| || | ||||| ||||| || || | || Sbjct 199499 CTTCTTCAAGTTGCGCCGGAAGCAGGTATACAAAACCTTCCGCTGACTGGGCTTGAGCCC 199440 Query 152292 GTCCACCACGTGAGGAATCGAACGCT 152317 ||| || ||| || |||||||||| Sbjct 199439 GTCGACTACGGATGGTATCGAACGCT 199414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214413073600