Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq6 107 2e-18
>seq6
Length=1760288
Score = 107 bits (118), Expect = 2e-18
Identities = 293/449 (65%), Gaps = 0/449 (0%)
Strand=Plus/Minus
Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211
|| || ||||| || || || || || || || | ||| ||||||| ||| ||| | |
Sbjct 173851 CCTGTACCGATGCCGTCGGCGCCGTTGATGAGGACCATGGGCACGATCGGAGAGTACATC 173792
Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271
||||| || | | |||||||| ||| |||| | | | || | ||| || |
Sbjct 173791 TCAGGTTCAATTGTCTTGCCGTCGTCTGTGTTGTACGTCAAGAGAGCCTCGTCGGTCTGG 173732
Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331
| || ||| | | | || | ||||| ||| | ||||| || | || ||||||
Sbjct 173731 TGAAAGATGCGCCGCGCGAAGGGCGACAGGCGGGTGTAGATGTATCGGGCACTCGCAGCA 173672
Query 117332 TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTG 117391
|| || ||||| ||||| | |||||| | ||||| ||||||| ||| | |||
Sbjct 173671 TCGTTACCACCCTGGAGACGGGAACCGAAGTTGCCACTAGGCTCCAGACAGTTGATGTTA 173612
Query 117392 TTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCA 117451
|| | || || ||| | || || | ||| ||||| || | || |||||||
Sbjct 173611 TTCGATCCGACGAAGGTCTGCGCTAGACCGACGATCGTCTGCTGCATTGACGTCTCACCA 173552
Query 117452 TGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGAC 117511
| || || ||| | | | || |||| |||| || | ||||| |||||| |
Sbjct 173551 TATGCGTAGGCTGTCAGACCGGAGACTGAGCCAGCCAACTCCACAACCTTGATGTCTTTC 173492
Query 117512 GTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATCC 117571
||| ||| || ||||| || | |||||| |||||||| |||||||| |||||
Sbjct 173491 TTCAAGTTGCGGCGGAAGCAGGTGTACAGCACCTTCCGCTGACTGGGCTTCAGTCCATCG 173432
Query 117572 GCCACGTGAGGGATCGAACGCTTGATGTC 117600
|||| ||||||||||||| | ||||
Sbjct 173431 ACCACAGATGGGATCGAACGCTGGTTGTC 173403
Score = 96.9 bits (106), Expect = 4e-15
Identities = 292/446 (65%), Gaps = 4/446 (1%)
Strand=Plus/Minus
Query 151874 ATCCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAA 151933
|||| ||||||||||| || ||||| |||| || | ||| ||||| || || | ||| |
Sbjct 199857 ATCCTGTACCGATGCCGTCGGCACCATTGATGAGGACCATGGGCACGATCGGAGAGTACA 199798
Query 151934 ACTCCGGCTCCA-CCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCC 151992
||| ||||| | | | ||| |||||||| | ||| |||| | | | ||||| |
Sbjct 199797 TCTCAGGCTCGATCGTCTTG-CCGTCATCGGTGTTGTACGTCAAGAGAGCCTCGTCAGTC 199739
Query 151993 GGATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCC 152052
| | ||| || || || | | || | || ||| ||||||| || | ||||||
Sbjct 199738 TGGTGGAAAATGCGACGGGCGAAGGGTGAGAGGCGAGTGTAGATGTAACGTGCGCTGGCA 199679
Query 152053 GCATCCTTGCC-ACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAG 152111
||||| || || ||||| || || | || || | || |||||||| |||||
Sbjct 199678 GCATCGTTACCTCCCTGCAAG-CGGGAACCGAAATTGCCGCTAGGCTCGAGACAGTTGAT 199620
Query 152112 GTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTC 152171
|||||||| |||||||| | || || | | ||||| || ||||| || ||
Sbjct 199619 GTTGTTGGATCCCACGAAGGTTTGGGCGAGACCGACAATTGTCTGCTGCATTGACGTCTC 199560
Query 152172 ACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTC 152231
|| | || || ||| || | | || |||| || | || | ||||| |||||
Sbjct 199559 GCCATATGCGTAGGCTGTCAGCCCAGAGACTGATCCAGCAAGCTCGACAACCTTGATGTC 199500
Query 152232 CGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACC 152291
| || ||| ||| | || |||| || | ||||| ||||| || || | ||
Sbjct 199499 CTTCTTCAAGTTGCGCCGGAAGCAGGTATACAAAACCTTCCGCTGACTGGGCTTGAGCCC 199440
Query 152292 GTCCACCACGTGAGGAATCGAACGCT 152317
||| || ||| || ||||||||||
Sbjct 199439 GTCGACTACGGATGGTATCGAACGCT 199414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547214413073600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |