Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq9 86.0 6e-12
>seq9
Length=1716618
Score = 86.0 bits (94), Expect = 6e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 6854 AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAG 6913
||||||||||| |||| || | ||||||||| | || |||| ||||| || || |||
Sbjct 152812 AGCTGGTCCGCACCCTTGCCAGTATAGTCCGCATGGCAGTCCCGGTACTCAGCGCCGAAG 152871
Query 6914 TGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCG 6960
|| | ||||||||| |||||||| || || | ||||| ||||| ||
Sbjct 152872 TGCCGCCACTGGAAGCCGTAGACTGGTCCGAGATCGCCTTCCTCGCG 152918
Score = 86.0 bits (94), Expect = 6e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 34385 CGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAG 34444
|| ||||| ||||| | || || |||||||| ||||||||| | ||||| || || |||
Sbjct 152918 CGCGAGGAAGGCGATCTCGGACCAGTCTACGGCTTCCAGTGGCGGCACTTCGGCGCTGAG 152859
Query 34445 TATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCT 34491
|| |||| || | ||||||||| | || |||| |||||||||||
Sbjct 152858 TACCGGGACTGCCATGCGGACTATACTGGCAAGGGTGCGGACCAGCT 152812
Score = 82.4 bits (90), Expect = 7e-11
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 6853 CAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAA 6912
|||||||||||| |||| || | ||||||||| | || || | ||||| || || ||
Sbjct 103575 CAGCTGGTCCGCACCCTTGCCAGTATAGTCCGCATGGCAGTCCTGGTACTCAGCGCCGAA 103634
Query 6913 GTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCG 6960
||| | ||||||||| |||||||| || || | ||||| ||||| ||
Sbjct 103635 GTGCCGCCACTGGAAGCCGTAGACTGGTCCGAGATCGCCTTCCTCGCG 103682
Score = 82.4 bits (90), Expect = 7e-11
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 34385 CGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAG 34444
|| ||||| ||||| | || || |||||||| ||||||||| | ||||| || || |||
Sbjct 103682 CGCGAGGAAGGCGATCTCGGACCAGTCTACGGCTTCCAGTGGCGGCACTTCGGCGCTGAG 103623
Query 34445 TATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTG 34492
|| | || || | ||||||||| | || |||| ||||||||||||
Sbjct 103622 TACCAGGACTGCCATGCGGACTATACTGGCAAGGGTGCGGACCAGCTG 103575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448261100039040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |