Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045. 2_202017-04-03] 232 sequences; 44,765,267 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq9 86.0 6e-12 >seq9 Length=1716618 Score = 86.0 bits (94), Expect = 6e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 6854 AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAG 6913 ||||||||||| |||| || | ||||||||| | || |||| ||||| || || ||| Sbjct 152812 AGCTGGTCCGCACCCTTGCCAGTATAGTCCGCATGGCAGTCCCGGTACTCAGCGCCGAAG 152871 Query 6914 TGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCG 6960 || | ||||||||| |||||||| || || | ||||| ||||| || Sbjct 152872 TGCCGCCACTGGAAGCCGTAGACTGGTCCGAGATCGCCTTCCTCGCG 152918 Score = 86.0 bits (94), Expect = 6e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 34385 CGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAG 34444 || ||||| ||||| | || || |||||||| ||||||||| | ||||| || || ||| Sbjct 152918 CGCGAGGAAGGCGATCTCGGACCAGTCTACGGCTTCCAGTGGCGGCACTTCGGCGCTGAG 152859 Query 34445 TATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCT 34491 || |||| || | ||||||||| | || |||| ||||||||||| Sbjct 152858 TACCGGGACTGCCATGCGGACTATACTGGCAAGGGTGCGGACCAGCT 152812 Score = 82.4 bits (90), Expect = 7e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 6853 CAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAA 6912 |||||||||||| |||| || | ||||||||| | || || | ||||| || || || Sbjct 103575 CAGCTGGTCCGCACCCTTGCCAGTATAGTCCGCATGGCAGTCCTGGTACTCAGCGCCGAA 103634 Query 6913 GTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCG 6960 ||| | ||||||||| |||||||| || || | ||||| ||||| || Sbjct 103635 GTGCCGCCACTGGAAGCCGTAGACTGGTCCGAGATCGCCTTCCTCGCG 103682 Score = 82.4 bits (90), Expect = 7e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 34385 CGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAG 34444 || ||||| ||||| | || || |||||||| ||||||||| | ||||| || || ||| Sbjct 103682 CGCGAGGAAGGCGATCTCGGACCAGTCTACGGCTTCCAGTGGCGGCACTTCGGCGCTGAG 103623 Query 34445 TATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTG 34492 || | || || | ||||||||| | || |||| |||||||||||| Sbjct 103622 TACCAGGACTGCCATGCGGACTATACTGGCAAGGGTGCGGACCAGCTG 103575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261100039040