Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1 134 2e-26
>seq1
Length=3303888
Score = 134 bits (148), Expect = 2e-26
Identities = 342/518 (66%), Gaps = 12/518 (2%)
Strand=Plus/Minus
Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242
||||| || || ||||| |||||||| || || || || |||||||| || || || |||
Sbjct 494504 TCGTTGGAGAAGGTGAGGCCGGGCATCAGCCCGCGCTTCTTGAGCCAGAAGATAGCGGCG 494445
Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302
|| || ||||| ||||| ||||| || || || ||||| || | || | ||| |
Sbjct 494444 AACGAACCAGAGAAGAAAATGCCCTCGACAGCTGCAAAGGCAATGAGACGGCAGCCGAAG 494385
Query 48303 CTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359
| | | ||| || |||||| | ||||||| | |||||||| | || ||
Sbjct 494384 GTCGATGCGTCGTCGCTGATCCACTTTAGTGCCCAGTTGGCCTTCTTGCGGATGCACGGG 494325
Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTT---TAACGTAAGTA 48416
|| | || || || |||||||| || | | | || | || | | ||| ||
Sbjct 494324 ATGTTGTCGATGGCGTTAAAGAG---GTATGTGCGTTGGCGAGGTTCGCTGATGTAGGTG 494268
Query 48417 TCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAA 48476
|| || | || || | |||||||| ||||| || || ||||| || |||||
Sbjct 494267 TCGATGAGTAGTGAGTAGGTCTCGGAGTGGATATTCTCCATCATGATCTGGAAGCCGTAG 494208
Query 48477 AAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTT 48536
|| || | || || | ||| || ||||| || ||||| || ||| ||||| ||
Sbjct 494207 AAGCAGCGAGCCTCAGGGATTTGCACCTCGCCACTGAATCGCTCGACCAGGTTCTCGTTG 494148
Query 48537 ACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTG 48596
|| || || || || || || || || | |||||| ||| || || ||||
Sbjct 494147 ACGATGCCGTCTGATGCGGCGAAGAAGGCAAGCACATGTGAAATGAAGAATCGCTCGTCA 494088
Query 48597 GAAGTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTC 48653
| | || || |||||||| | | |||||| || | ||| | || || ||||||
Sbjct 494087 TCATTGAGACGCTTGTTCCAGTCGTGCAGATCTTTCGACAGATCAATCTCCTCTGCTGTC 494028
Query 48654 CAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691
|| |||||||||||||| || || ||||| | ||||||
Sbjct 494027 CAGAATGATGCCTCTGCCTTCTTGTACATCTGCCATAT 493990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694666785460480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |