Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq2 163 7e-35
seq23 134 3e-26
>seq2
Length=2712501
Score = 163 bits (180), Expect = 7e-35
Identities = 162/206 (79%), Gaps = 3/206 (1%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||||||||||| || || ||||| |||||||||||| ||||||
Sbjct 1305630 CAAATTTTCGTCAAGACTCTCACAGGCAAGACCATCACGCTCGAGGTGGAATCATCAGAC 1305689
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || ||||||||||| || || || ||||| || ||||||||
Sbjct 1305690 ACGATCGACAACGTGAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCAGACCAGCAG 1305749
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| || |||||||| || || ||| | || || || ||||| |||| |||||| ||| |
Sbjct 1305750 CGTCTCATCTTCGCTGGGAAGCAGTTGGAGGACGGCAGGAC-CTTGAGCGATTACAACAT 1305808
Query 178103 CCAAAAAGAATCAACACTGCATCTTG 178128
||| || || || || ||||| ||||
Sbjct 1305809 CCAGAAGGAGTCGACGCTGCA-CTTG 1305833
Score = 163 bits (180), Expect = 7e-35
Identities = 162/206 (79%), Gaps = 3/206 (1%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||||||||||| || || ||||| |||||||||||| ||||||
Sbjct 1361757 CAAATTTTCGTCAAGACTCTCACAGGCAAGACCATCACGCTCGAGGTGGAATCATCAGAC 1361816
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || ||||||||||| || || || ||||| || ||||||||
Sbjct 1361817 ACGATCGACAACGTGAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCAGACCAGCAG 1361876
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| || |||||||| || || ||| | || || || ||||| |||| |||||| ||| |
Sbjct 1361877 CGTCTCATCTTCGCTGGGAAGCAGTTGGAGGACGGCAGGAC-CTTGAGCGATTACAACAT 1361935
Query 178103 CCAAAAAGAATCAACACTGCATCTTG 178128
||| || || || || ||||| ||||
Sbjct 1361936 CCAGAAGGAGTCGACGCTGCA-CTTG 1361960
Score = 163 bits (180), Expect = 7e-35
Identities = 162/206 (79%), Gaps = 3/206 (1%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||||||||||| || || ||||| |||||||||||| ||||||
Sbjct 1459282 CAAATTTTCGTCAAGACTCTCACAGGCAAGACCATCACGCTCGAGGTGGAATCATCAGAC 1459341
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || ||||||||||| || || || ||||| || ||||||||
Sbjct 1459342 ACGATCGACAACGTGAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCAGACCAGCAG 1459401
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| || |||||||| || || ||| | || || || ||||| |||| |||||| ||| |
Sbjct 1459402 CGTCTCATCTTCGCTGGGAAGCAGTTGGAGGACGGCAGGAC-CTTGAGCGATTACAACAT 1459460
Query 178103 CCAAAAAGAATCAACACTGCATCTTG 178128
||| || || || || ||||| ||||
Sbjct 1459461 CCAGAAGGAGTCGACGCTGCA-CTTG 1459485
Score = 150 bits (166), Expect = 4e-31
Identities = 157/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || || || |||||||||||||| || ||| |||
Sbjct 1333234 CAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGAC 1333293
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| || || || ||||| ||||||||
Sbjct 1333294 ACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAGCAG 1333353
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || |||||||| || || ||||| || || | |||||| |||| || ||| ||
Sbjct 1333354 CGCCTCATTTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTTTCCGACTACAACATC 1333413
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 1333414 CAGAAGGAGTCTACGCTCCACCTCGT 1333439
Score = 149 bits (164), Expect = 2e-30
Identities = 153/200 (77%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| ||||| | || || || || |||||||| |||||||| ||||| |||||||||
Sbjct 1305180 TTCGTCAAAACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATC 1305239
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || ||||| ||||| || ||||| || || || ||||| |||||||| || |
Sbjct 1305240 GACAATGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCTTG 1305299
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109
||||||||||| || |||||||| ||||| | || || |||| || ||| |||| ||
Sbjct 1305300 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAG 1305359
Query 178110 GAATCAACACTGCATCTTGT 178129
|| || || || ||||| ||
Sbjct 1305360 GAGTCCACCCTTCATCTCGT 1305379
Score = 149 bits (164), Expect = 2e-30
Identities = 153/200 (77%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| ||||| | || || || || |||||||| |||||||| ||||| |||||||||
Sbjct 1361307 TTCGTCAAAACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATC 1361366
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || ||||| ||||| || ||||| || || || ||||| |||||||| || |
Sbjct 1361367 GACAATGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCTTG 1361426
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109
||||||||||| || |||||||| ||||| | || || |||| || ||| |||| ||
Sbjct 1361427 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAG 1361486
Query 178110 GAATCAACACTGCATCTTGT 178129
|| || || || ||||| ||
Sbjct 1361487 GAGTCCACCCTTCATCTCGT 1361506
Score = 149 bits (164), Expect = 2e-30
Identities = 153/200 (77%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| ||||| | || || || || |||||||| |||||||| ||||| |||||||||
Sbjct 1458832 TTCGTCAAAACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATC 1458891
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || ||||| ||||| || ||||| || || || ||||| |||||||| || |
Sbjct 1458892 GACAATGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCTTG 1458951
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109
||||||||||| || |||||||| ||||| | || || |||| || ||| |||| ||
Sbjct 1458952 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAG 1459011
Query 178110 GAATCAACACTGCATCTTGT 178129
|| || || || ||||| ||
Sbjct 1459012 GAGTCCACCCTTCATCTCGT 1459031
Score = 145 bits (160), Expect = 2e-29
Identities = 152/200 (76%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || || | || || || || |||||||| |||||||| ||||| |||||||||
Sbjct 1333012 TTCGTAAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCCGACACCATC 1333071
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || ||||| ||||| || ||||| || || || ||||| |||||||| || |
Sbjct 1333072 GACAATGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCTTG 1333131
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109
||||||||||| || |||||||| ||||| | || || |||| || ||| |||| ||
Sbjct 1333132 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAG 1333191
Query 178110 GAATCAACACTGCATCTTGT 178129
|| || || || ||||| ||
Sbjct 1333192 GAGTCCACCCTTCATCTCGT 1333211
Score = 145 bits (160), Expect = 2e-29
Identities = 156/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || ||||||||||| || || ||||| |||||||| ||| || |||
Sbjct 1333462 CAAATCTTCGTCAAGACTCTCACAGGCAAGACCATCACGCTCGAGGTAGAATCATCCGAC 1333521
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || ||||| |||||||| || || ||||| || ||||||||
Sbjct 1333522 ACGATCGACAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAGCAG 1333581
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||||||||| || || ||| | || ||||| |||| | ||| || ||| ||
Sbjct 1333582 CGTCTTATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGGACGTTGAGCGACTACAACATC 1333641
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || ||||| ||||
Sbjct 1333642 CAGAAGGAGTCGACGCTGCA-CTTG 1333665
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || || || |||||||||||||| || || |||
Sbjct 1305402 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCCGAC 1305461
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| |||||||| || || || ||||| ||||| ||
Sbjct 1305462 ACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAACAG 1305521
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || |||||||| || || ||||| || || | |||||| |||| || ||| ||
Sbjct 1305522 CGCCTCATTTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTTTCCGACTACAACATC 1305581
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 1305582 CAGAAGGAGTCGACTCTCCACCTCGT 1305607
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || || || |||||||||||||| || || |||
Sbjct 1361529 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCCGAC 1361588
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| |||||||| || || || ||||| ||||| ||
Sbjct 1361589 ACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAACAG 1361648
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || |||||||| || || ||||| || || | |||||| |||| || ||| ||
Sbjct 1361649 CGCCTCATTTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTTTCCGACTACAACATC 1361708
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 1361709 CAGAAGGAGTCGACTCTCCACCTCGT 1361734
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || || || |||||||||||||| || || |||
Sbjct 1459054 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCCGAC 1459113
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| |||||||| || || || ||||| ||||| ||
Sbjct 1459114 ACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAACAG 1459173
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || |||||||| || || ||||| || || | |||||| |||| || ||| ||
Sbjct 1459174 CGCCTCATTTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTTTCCGACTACAACATC 1459233
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 1459234 CAGAAGGAGTCGACTCTCCACCTCGT 1459259
>seq23
Length=594546
Score = 134 bits (148), Expect = 3e-26
Identities = 137/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || || ||||| || || || |||||||| |||||||| || ||||| |||
Sbjct 495900 TTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCCGACACGATC 495841
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || ||||| ||||| |||||||| || |||||||| || |||||||| || |
Sbjct 495840 GACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCGCCAGACCAGCAGCGCTTG 495781
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
|| ||||||||||| ||||| || ||||| ||||| || ||||| ||| |||| ||
Sbjct 495780 ATTTTCGCCGGAAAGCAGCTTGAGGATGGCAGGACACTGAGTGATTACAACATCCAGAA 495722
Score = 129 bits (142), Expect = 1e-24
Identities = 136/179 (76%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || || ||||| || || || |||||||| |||||||| || ||||| |||
Sbjct 439055 TTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCCGACACGATC 438996
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || ||||| ||||| |||||||| || |||||||| || |||||||| || |
Sbjct 438995 GACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCGCCAGACCAGCAGCGCTTG 438936
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
|| ||||||||||| ||||| || ||||| ||||| || |||| ||| |||| ||
Sbjct 438935 ATTTTCGCCGGAAAGCAGCTTGAGGATGGCAGGACACTGAGTAATTACAACATCCAGAA 438877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203727621909008
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