Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raffaelea_20quercivora_20[genbank_20GCA_5F001662465.1_202016-06-08] 26 sequences; 25,862,907 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq10 84.2 2e-11 >seq10 Length=919426 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || || ||||||||||| || |||||||| || | || || |||||||||||||| Sbjct 645290 TGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGGCCGTCCTCCAGCTGC 645231 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || || || | || | |||||||| || || | | ||||||||| || || Sbjct 645230 TTGCCTGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTG 645171 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | ||||| |||| |||||| ||| | || || || || || ||| Sbjct 645170 GACTTGACATTGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTG 645111 Query 48704 AGAGTTTTCACAAAAATCTGCATCGT 48729 || || || || || |||||||| || Sbjct 645110 AGGGTCTTGACGAAGATCTGCATGGT 645085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421251066516026