Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raffaelea_20quercivora_20[genbank_20GCA_5F001662465.1_202016-06-08] 26 sequences; 25,862,907 total letters Query= NC_006560.1 Length=150715 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=5014741 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 10499 GTCGTCATCATCGGCCAGGACCCCTATCACCAGCCCGGCCAGGCCCACGGCCTCGCGTTT 10558 |||||||| |||||||||||||||| ||| | | ||||||||||||||||||||| || Sbjct 3780915 GTCGTCATTCTCGGCCAGGACCCCTACCACAACCACGGCCAGGCCCACGGCCTCGCCTTC 3780974 Query 10559 AGCGTCAGGCCCGGCACCCCCGCTCCCCCCAGCCTGCGCAACAT 10602 ||||| ||| || ||| | || || ||||||||||| Sbjct 3780975 TCCGTCAAGCCGCCCATCCCGCCGCCGCCGTCGCTGCGCAACAT 3781018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482159843298000