Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercivora_20[genbank_20GCA_5F001662465.1_202016-06-08]
26 sequences; 25,862,907 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1 86.0 8e-12
>seq1
Length=5014741
Score = 86.0 bits (94), Expect = 8e-12
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354
|||| || || || || ||| |||||| |||||||| | ||| || || |||||
Sbjct 1638583 AACAGCAGGCAGGCAAAGTCGGTGTGCAGGCCCTCGTCGCGGGAAATCAGCTCATTGGAG 1638524
Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414
|| || || || ||||| ||||||||||| || ||||| || ||||| | ||| | ||
Sbjct 1638523 AAAGTCAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGACGAGAAGGCGCCG 1638464
Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33446
||||| || || || || |||||||| ||
Sbjct 1638463 CTGAAGAAAATGCCCTCGACGGCAGCAAATGC 1638432
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946997542160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |