Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raffaelea_20quercivora_20[genbank_20GCA_5F001662465.1_202016-06-08] 26 sequences; 25,862,907 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 8e-12 >seq1 Length=5014741 Score = 86.0 bits (94), Expect = 8e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || || || || ||| |||||| |||||||| | ||| || || ||||| Sbjct 1638583 AACAGCAGGCAGGCAAAGTCGGTGTGCAGGCCCTCGTCGCGGGAAATCAGCTCATTGGAG 1638524 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || || || || ||||| ||||||||||| || ||||| || ||||| | ||| | || Sbjct 1638523 AAAGTCAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGACGAGAAGGCGCCG 1638464 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33446 ||||| || || || || |||||||| || Sbjct 1638463 CTGAAGAAAATGCCCTCGACGGCAGCAAATGC 1638432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946997542160