Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raffaelea_20quercivora_20[genbank_20GCA_5F001662465.1_202016-06-08] 26 sequences; 25,862,907 total letters Query= NC_007653.1 Length=156487 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 >seq1 Length=5014741 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/105 (80%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 11408 GTCGTCATCATCGGTCAGGACCCCTATCACCAGCCCGGCCAGGCCCACGGCCTCGCGTTC 11467 |||||||| |||| ||||||||||| ||| | | ||||||||||||||||||||| ||| Sbjct 3780915 GTCGTCATTCTCGGCCAGGACCCCTACCACAACCACGGCCAGGCCCACGGCCTCGCCTTC 3780974 Query 11468 AGCGTCAGACCCGGCACCCCCGCC-CCGCCCAGCCTGCGCAACAT 11511 ||||| | ||| | |||||| ||||| ||||||||||| Sbjct 3780975 TCCGTCA-AGCCGCCCATCCCGCCGCCGCCGTCGCTGCGCAACAT 3781018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500630237295120