Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercivora_20[genbank_20GCA_5F001662465.1_202016-06-08]
26 sequences; 25,862,907 total letters
Query= NC_021221.1
Length=45781
Score E
Sequences producing significant alignments: (Bits) Value
seq1 87.8 5e-13
>seq1
Length=5014741
Score = 87.8 bits (96), Expect = 5e-13
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 1052 GCCGGTTACGACTTGTGTAGCGCGGCGGACGTGATCGTGCCCGCCCAAGGGCGAG-CGCT 1110
||||| |||||| ||| |||| | |||| | | ||||| | ||||| || ||||
Sbjct 673753 GCCGGCTACGACCTGTACGCCGCGCGTGCTGTGACCAT-CCCGCACCAGGGCAAGGCGCT 673811
Query 1111 GATCCCGACCGACCTGTCCTTCGAGTTCCCGAAGGGGGTCTATGGGCGTCTCGCTCCTCG 1170
|| ||||||||| || | | | ||||| || || || || | || || ||
Sbjct 673812 CGTCGATACCGACCTGGCCATTGCGGTCCCGCCCGGCACGTACGGCCGCATTGCGCCGCG 673871
Query 1171 TTCGGGGCTGGCGGTGAAACACTTTATCGATGTGGGGGCGGGCGTGATAGACGGCGACTA 1230
|||||||| || | || |||||||||||| ||| ||||| || || |||| ||||||
Sbjct 673872 GTCGGGGCTTGCCGCCAAGCACTTTATCGATACGGGAGCGGGTGTCATTGACGCCGACTA 673931
Query 1231 TCGAGGCATCGTGTGCGTGCTGCTGTTTAA 1260
|| ||| ||| |||||||||| || ||
Sbjct 673932 CCGCGGCCAGGTGCGCGTGCTGCTCTTCAA 673961
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146377554805916
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |