Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raffaelea_20quercivora_20[genbank_20GCA_5F001662465.1_202016-06-08] 26 sequences; 25,862,907 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2 250 3e-60 seq5 183 4e-40 seq1 140 4e-27 seq6 138 1e-26 seq4 131 2e-24 seq7 129 7e-24 seq3 116 5e-20 >seq2 Length=4288194 Score = 250 bits (276), Expect = 3e-60 Identities = 347/486 (71%), Gaps = 15/486 (3%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| |||||||| ||||||| ||||||||| || ||||| || | || ||||||||| Sbjct 3316293 CTGGTCCACGTAGCGGGCCGTGTTGTTAAAGACACGAAGCATAGGGATGATGCCGTTGGA 3316234 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 |||||||||||| || | ||||| ||||| |||||| | ||| | | || Sbjct 3316233 TGTGCCGTTGGTGCCGGCAATGTAGGAGCCGGTGGCGCGAATGCGGTGGACATTCAGACC 3316174 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 |||||| ||||||| ||||||||| | || ||| ||||||||||||||||||||||| Sbjct 3316173 GATGCCACCGGCCGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCGTAGATGCCCTC 3316114 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || |||| |||||||||||||||| ||||| || || || | || | |||||| Sbjct 3316113 AATGCTGTCGTCCTTCATGTCCACGAGGAAGCAGGAAGACAGCTGAGCCTGGGGCGTGCC 3316054 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||||||||||||||| |||| || ||||| |||| |||||| || ||| || Sbjct 3316053 GGCGTTGAAGAGCGTCGGCGAGGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTATGT 3315994 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 ||| |||||| ||| ||||||| |||| || || | ||| || Sbjct 3315993 CTCGACAACGCGCTCCA---CATCGTC-----------ACCCC-AGATACCAACGGCCAC 3315949 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGGA 1630484 ||||||| ||||| ||| ||||||||||| | ||| | |||| |||||||| Sbjct 3315948 ACGCATGATCATGTGCTGCGGCCGCTCGACAATCTTACCGTCGAGCTTGAGGAGGTAGGA 3315889 Query 1630485 CCGGCGCATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGTGGCGGATGGC 1630544 || || |||| ||| ||||||||| || || |||||||||| | ||||| Sbjct 3315888 GCGCTCCAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCGCGGTCGTAGACAATGGC 3315829 Query 1630545 GGCGTC 1630550 | ||| Sbjct 3315828 CGAGTC 3315823 Score = 176 bits (194), Expect = 6e-38 Identities = 375/543 (69%), Gaps = 24/543 (4%) Strand=Plus/Minus Query 1626981 CTGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTG-GTGCGCAGATAGTACATGC 1627039 ||||||||| || |||||||||| | ||||| | |||| |||||||| |||||||||| Sbjct 3317694 CTGGTCGACCGTGAACTGGATGGGCTGTGCGGCAG-CCTGCGTGCGCAGGTAGTACATGC 3317636 Query 1627040 CGGTCTTGAGGCCGCGGCGCCA-CGCGTAGGCGTGCATCGACGTGATGC-GCTCGGGCGT 1627097 | ||||||||||| | ||| | ||| | |||||| ||||| || | | || Sbjct 3317635 CCGTCTTGAGGCCCAGCTTCCAGCCCGT-GAAGTGCATGCTTGTGATCTTGCCCATG-GT 3317578 Query 1627098 CGCGTCGGCGCA-GTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGG 1627156 || || |||| || | ||| |||||||| |||||||| | ||| | || || | Sbjct 3317577 CGGCTCA-CGCATGTGGATGTTCAGCGACTGCGACTGGTCGATAAAGGCACCACGGTCTG 3317519 Query 1627157 CCGCCATGT---CGATGGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCT 1627213 | ||||| | | || || ||| | | | ||||||||| |||||| | | ||||| Sbjct 3317518 CAGCCATCTGCACAATCGT---CCGCTGCGAGATCTCCCACACCGTCTTGTACAGGGCCT 3317462 Query 1627214 TGAGGTCGGGCGGCACCTCGTCGTCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCGACGA 1627273 ||| ||||| ||| | || | || | ||| | ||| |||| | |||| | || Sbjct 3317461 TGATGTCGGCCGGGAT------GTTGGGAATGTTCTGGATCGAACCGTTCTCCGCAATGA 3317408 Query 1627274 GCCTGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCAGGCGCTTGACCAGGTGGC 1627333 | || | || | || |||||| || | | |||| ||||| ||| Sbjct 3317407 TGCGGTTCTTCATGTTGTCCGACCACAGACCCATGTCGACCAGGTCCTTGAGCAGCCACG 3317348 Query 1627334 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTG-ATG 1627392 |||||||||| || ||||| | ||||| || |||| |||||||||| ||| ||| Sbjct 3317347 GGTTGACCACCTGGAACTCGCCGGCCAGCACACGCCGCGAGTAGATGTTGGACGTGTATG 3317288 Query 1627393 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCC 1627452 | ||| | |||| |||||||||| ||||||||||||| ||||| ||||| ||||| Sbjct 3317287 GC-TCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTCGACGCCGTCGGCATCGGCGCC 3317229 Query 1627453 ACGAGGAGCGAGTTGCGCAGGCCGTGCT-GTCGAACTAGCGCGCGCAGCGCGTCCCAGTC 1627511 || || || |||||||| ||||||| | || || || ||||||| ||||||||| Sbjct 3317228 ACCAGCAGACTGTTGCGCACACCGTGCTCCTTGATCTTCAGC-CGCAGCGAGTCCCAGTC 3317170 Query 1627512 CCA 1627514 ||| Sbjct 3317169 CCA 3317167 Score = 118 bits (130), Expect = 1e-20 Identities = 328/490 (67%), Gaps = 23/490 (5%) Strand=Plus/Plus Query 733082 GCCCGAGTTGGGCGACAAACTGTCGTCGCGCCACGGCCAAAAGGGCACCGTGGGCAGCGT 733141 ||||||| | |||||||| | ||||| |||||||||||||||||| ||| |||| | | Sbjct 3449879 GCCCGAGATCGGCGACAAGTTCTCGTCCCGCCACGGCCAAAAGGGCGTCGTCGGCATCAT 3449938 Query 733142 GCGCTCCACC--GAGGACATGCCCTGGT-CGCCGCGCGGCGGCGCCACGCCCGACATCGT 733198 || || | | || |||||||||| | || | | |||| || | ||||||||| | Sbjct 3449939 -CG-TCGAGCAGGAAGACATGCCCTTTTCCGACAC-CGGCCTCGTC---CCCGACATCAT 3449992 Query 733199 GATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGCTCGAGGCCCTCCT 733258 || ||||| |||| |||||||||| ||||| | |||||| || | ||| ||| Sbjct 3449993 CATGAACCCCCACGGTTTCCCGTCGCGTATGACTGTCGGCAAGCTGTTTGAGTGTCTCAC 3450052 Query 733259 GGGCAAGG---TGGCC--TGCCGCGAGG--GCTACATCGGCGACGGC-ACGCCCTTTGGC 733310 ||||||| || | ||||| || | || || |||| | ||| ||| |||| || Sbjct 3450053 CGGCAAGGCCTCGGTCGTTGCCG-GACGCCGCGACTACGGCTATGGCGACG-CCTTCCGC 3450110 Query 733311 GGCGTCACCNNNNNNNNNNNNNNNNNNGAGTTGGCCCGCCACGGGTGCGAGCGCTACGGC 733370 | || ||| | | |||| |||| | | | | ||| Sbjct 3450111 TCCCATCCCGTCGAGGCCATGGGCGCCGAGCTCGTCCGCAACGGCTTCTCCTGGGAGGGC 3450170 Query 733371 AAGGAGGTGCTCTACCACCCGCA-CACCGGCGAGCCCATGGCGGCGTTGATCTTCTCGGC 733429 ||||| |||| ||| | ||| ||||||||||||| | | ||| |||||| | Sbjct 3450171 AAGGA-CTGCTTCACCTCGGGCATCACCGGCGAGCCCCTCGAGGCCCACATCTTCAACGG 3450229 Query 733430 GCCGGTCTACTACCAGGCCCTCCGGCACGTGGCCATCGACAAGATCCACGCGCGC-CCGC 733488 ||| ||||||||||| |||| |||| ||| | |||||||| ||| ||||| || Sbjct 3450230 GCCCATCTACTACCAGCGCCTCAAGCACATGGTCCAGGACAAGATGCACTCGCGCGCCAA 3450289 Query 733489 GCGGTCCCGTGCAGATGCTCACCAAGCAGCCGGTCGAGGGCCGCTCGCGCTCGGGCGGCT 733548 | || | || || || ||||| |||||| ||| |||||||||||| |||||| Sbjct 3450290 GGGGCCGCGCGC-CATTCTCACGCGCCAGCCGACCGAAGGCCGCTCGCGCGACGGCGGCC 3450348 Query 733549 TCCGTCTCGG 733558 | || ||||| Sbjct 3450349 TGCGCCTCGG 3450358 Score = 100 bits (110), Expect = 3e-15 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||| |||||| | || |||||| || || || | || |||||| | || || ||| Sbjct 3871320 GCCGCAAACTACATGGATATCAAGAGCCTTCTTGACGTAGGCTGCAAGACCGTCGCGAAC 3871379 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||| ||||||||||| |||||||| |||||||| || |||||||||| | ||| Sbjct 3871380 ATGATTAAGGGCAAGTCTCCCGAGGAAATCCGCAAAACGTTTAACATCACGAACG 3871434 Score = 98.7 bits (108), Expect = 1e-14 Identities = 159/223 (71%), Gaps = 18/223 (8%) Strand=Plus/Plus Query 507598 GGTCGAGCGCCACCTGCGCGCGGGCGACGCCGTGGTGATGAACCGGCAGCCGTCGCTGCA 507657 ||| || || |||||| | |||||| ||| || | |||||||||||||||||||| Sbjct 4001527 GGTGGACCGGCACCTGGAAGACGGCGACATTGTGCTGTTCAACCGGCAGCCGTCGCTGCA 4001586 Query 507658 CA---TGGGCTCCATGCTCATGCACAAGGT---GGTGCCCATGCCCGGGCGCACCATGCG 507711 || || | |||| || ||| ||| ||||| || | |||| || | || Sbjct 4001587 CAAGCTGAGTATCATG-TC--GCATCTGGTCAAGGTGCG---GCACTGGCGGACGTTCCG 4001640 Query 507712 ATTCAACCTGGCCGTCACGGGCACC---TACAACGCCGACTTTGACGGCGACGAGATGAA 507768 ||||| | || | |||| ||||| |||||||||||||||||||||||||| Sbjct 4001641 GCTCAACGAGTGTGT---GTGCACGCCGTACAATGCCGACTTTGACGGCGACGAGATGAA 4001697 Query 507769 CCTGCACGTGCCCCAGTCCGAGACGGCGCGCGCCGAGGTGACG 507811 |||||||||||| ||| | ||| ||| ||||| |||| |||| Sbjct 4001698 CCTGCACGTGCCGCAGACGGAGGAGGCACGCGCAGAGGCGACG 4001740 Score = 96.9 bits (106), Expect = 4e-14 Identities = 296/457 (65%), Gaps = 16/457 (4%) Strand=Plus/Minus Query 1628152 GGCGACGAAAACTGGACGATCTCGGTGCACAGGTTGGCCGACGT-CG--TCGTACCCAGG 1628208 |||| ||| ||| || ||||| ||||||||||| ||| | || | || |||||| Sbjct 3316742 GGCGCCGAGTACTCCACAATCTCCGTGCACAGGTT---CGAGCTGCGGATGGTGCCCAGG 3316686 Query 1628209 TTCTGCTGGTTGGTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTC 1628268 |||| ||||||| | | ||||| | |||||||| ||||||| | || ||| ||| Sbjct 3316685 TTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAACGGGTTGCCCGTC 3316626 Query 1628269 TCGATCTGCGCCGCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTC---CGC 1628325 || |||||||| | | ||||| |||| | || | || | ||| || || Sbjct 3316625 TCCGTCTGCGCCTCCAGAATGGCGTACCACAGCTTCTGGGC---CTTGACCTTCTTACGA 3316569 Query 1628326 GCGCGGCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCG 1628385 | ||||||| ||||| || |||||||||| || Sbjct 3316568 CCACGGCCCTCGCTCTCGTACTTCTCGTACAGCGCCTCAAACTCCTCGCCGTAGCAATCC 3316509 Query 1628386 TGCAGGCCGGGCGC-CTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCG 1628444 |||||||| ||| ||| || || | |||| ||| ||||| |||| || | || Sbjct 3316508 GCCAGGCCGG-CGCACTCATTGGGGCACATCAGCGTCCACTCGCCGTTGGTCTCCACACG 3316450 Query 1628445 GCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTC 1628504 ||| || || || |||| || ||| || || || || || ||| |||||| Sbjct 3316449 CTTCATGAACAGATCGGGGATCCAGAGAGCGAGGAAAAGATCACGGGCACGGACCTCCTC 3316390 Query 1628505 CTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAG 1628564 ||| || |||||||| ||||| || | || | | ||||||||||||||||||| Sbjct 3316389 CTTACCCTGGTTCTTCCGCAGGTCCAGGAACTCAAAGACATCGGCGTGCCACGGCTCCAA 3316330 Query 1628565 GTAGCAGGCA-AAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 |||| | ||| ||||| || ||||||| ||| || Sbjct 3316329 GTAG-ATGCAGAAGGCACCGGGGCGCTTGTTGCCACC 3316294 Score = 96.9 bits (106), Expect = 4e-14 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 1627868 CGTCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGGCGGG 1627927 |||| || || |||||||| || | || || ||||||||||||| ||| || || | Sbjct 3316963 CGTCTGCCAGACCCTGCACACCCAGACCAATGGGCCGGTGGCGCATGTTGCTGTTTCGTG 3316904 Query 1627928 CCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTGCCCACCACGACCT 1627987 |||||||||| ||||||| ||| | ||| || | |||||||||||||| || || | || Sbjct 3316903 CCTCGGGCACGGGGTAGTAGTTCACGTCAATGATGCGGTTGAGGTTGCGGACAACCAACT 3316844 Query 1627988 GGACGATCTCGTGCAG 1628003 | || |||||||| Sbjct 3316843 GCGTGACGTCGTGCAG 3316828 Score = 91.5 bits (100), Expect = 2e-12 Identities = 225/337 (67%), Gaps = 11/337 (3%) Strand=Plus/Plus Query 732342 ACGCACGTCGAGGTGCACCCGCTGCTCATGCTCGGGGCC-TGCGCGTCCATCATCCCGTT 732400 |||||| ||||| | | || | ||| ||||| ||| || || || ||||||| || Sbjct 3449178 ACGCACCTCGAGATCGAGCCCTTTACCATCCTCGGCGCCGTGGCCGGCC-TCATCCCCTT 3449236 Query 732401 CTCCAACCACAACCAGGCGCCGCGCAACATCTACCAGACGGCCATGGGCAAGCAGAGCAA 732460 | | ||||||||||| ||||||| |||| |||||| ||||||||||||||| || Sbjct 3449237 CCCGCACCACAACCAGTCGCCGCGAAACACCTACCAATGCGCCATGGGCAAGCAGGCCAT 3449296 Query 732461 GGCCGTCGTGTCGCTCAACGCCGACCACGCCATCGACACGGTGTCGCACGCCCTGTGCTA 732520 | || | | | |||| |||| |||||||||| || | || |||| ||| Sbjct 3449297 CGGCGCCATTGCCTACAACCAGTTCCACCGCATCGACACGCTGCTGTACACCCTCGTCTA 3449356 Query 732521 CCCGCAGGTGCCGCTGGTGCAGACC---GCCATGGAGGACGTCATCGGCGCCACGCGCCT 732577 ||||||| ||| ||||| ||| |||| ||| ||| | || || | || Sbjct 3449357 CCCGCAGCGGCCCATGGTGATCACCAAGACCATTGAGCTCGTGCACTACGACAAG---CT 3449413 Query 732578 CCCGATGGGCCAGAATGCGCGCGTGGCCATCATGAGCGACCC---CTACAACCAGGAGGA 732634 ||| |||||||| || ||| | | ||||| | || | |||| | ||||| Sbjct 3449414 GCCGGCCGGCCAGAACGCCACCGTCGTCGTCATGTCCTACTCGGGCTACGATATCGAGGA 3449473 Query 732635 CTCGCTCGTGCTCAAGCAGGACTTTGTCGACCGCGGC 732671 | ||||||||||| ||| || | | || |||||| Sbjct 3449474 TGCCCTCGTGCTCAACAAGGCCTCTATTGATCGCGGC 3449510 >seq5 Length=2216499 Score = 183 bits (202), Expect = 4e-40 Identities = 276/390 (71%), Gaps = 8/390 (2%) Strand=Plus/Minus Query 18100 GGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCA 18159 |||||||||||| | |||||| |||||| |||| ||||||||||| || | | Sbjct 1454908 GGCGAGTCGCACTGCCGTTCCGTCGGTTGCATCGTCGATGGCGTGCCGCCCGGCCTCGCG 1454849 Query 18160 CTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAG-GGCGCACT 18218 ||| | ||||| ||||||||||| ||| |||| || || || ||||||||| | ||| | Sbjct 1454848 CTGACGGAGGCAGACATCCAGCCGCAGATGGACCGTCGGCGGCCGGGCCAGTCGAGCA-T 1454790 Query 18219 TTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCT 18278 | ||||||||||||||| || || || |||||||||||||| ||| |||| | Sbjct 1454789 CACGACGCCGCGCAACGAGGAGGACCGTGTGGAGATCCAGTCGGGCACCGAGTTCGGCGT 1454730 Query 18279 CACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTA 18338 ||| |||||| | |||||||||||| || |||| |||||||||||| ||||| Sbjct 1454729 CACTCTCGGCACCCCCGTCGGCCTCCGCGTCCTCAACAAGGACCAGCGGCCCAAGGACTA 1454670 Query 18339 ------TTCCGACATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTACACCTACATGGC 18392 | || || | | | ||||| ||| |||||||||| ||||| ||| Sbjct 1454669 CGGCGGTGCCACCACGGACCGCTTCCCGCGCCCCAGCCACGCCGACTGGACCTATCTGGA 1454610 Query 18393 CAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCAT 18452 ||||||||| ||||||| ||||| ||||| ||||| || ||| | Sbjct 1454609 AAAGTACGGCGTCAAGGCCAGCAGCGGCGGCGGCCGCAGCAGCGCCCGTGAAACCATTGG 1454550 Query 18453 GCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 ||||| ||||||||||| | |||||||| Sbjct 1454549 CCGCGTGGCCGCCGGCGCCATTGCCGAGAA 1454520 Score = 138 bits (152), Expect = 1e-26 Identities = 125/156 (80%), Gaps = 1/156 (1%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||||||||| || || ||||| ||||| | ||| | |||||||||||| Sbjct 1454317 GACAGCATCGGCGGCACCGTCACCTGCGTCATCCGCAATGCCCCGCCCGGCCTCGGCGAG 1454258 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| |||||||| ||| ||||||||||||||| |||||||||||| Sbjct 1454257 CCCTGCTTCGACAAGCTCGAGGCCCTGCTGGCCCACGCCATGCTGAGCATCCCGGCCACC 1454198 Query 19167 AAGGGATTCGAGATTGGCAGCGG-GTTTGCGGGTGC 19201 ||||| || || || ||| || ||| ||||||| Sbjct 1454197 AAGGGCTTTGAAATCGGCTCAGGCTTTTCCGGGTGC 1454162 >seq1 Length=5014741 Score = 140 bits (154), Expect = 4e-27 Identities = 225/319 (71%), Gaps = 12/319 (4%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| ||||| |||||| |||||| |||||||||||||| | || ||||| Sbjct 1638868 GCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATG 1638809 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | || || |||| | |||| ||| ||| ||||| | | Sbjct 1638808 TTCTCCATAAAGTCAAAGGGATTGGTGGAGCGGTAGACCTTGTCGTTGCCGAGAGCGACC 1638749 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||| |||||||| || ||||| |||||||| ||||||| |||||||||||| | Sbjct 1638748 AGCAGACGGTCGGCAACGAACTCAATGTACTGCTTCATGAGGGTGGCGTTCATGCCCAGA 1638689 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || ||||| | |||| ||| |||||| | ||| |||| |||||| |||||||| Sbjct 1638688 AGAGCACAGGGCAGGGCCTCGGTCAAAAACTCCTGCTCAATCTTGACGGCATCGACGATA 1638629 Query 868931 ATCTGCCTGGGCACG-TCGGC-----CGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGG 868984 || | ||||| | | || || || | | ||||| | | | | | | |||||| Sbjct 1638628 ATGT-CCTGG--ATGATCTGCTTGCTCGGGCGGTTGTTCAGGTG---GGAGAACAGCAGG 1638575 Query 868985 CAGGCAAAGTCGCAGTGCA 869003 |||||||||||| ||||| Sbjct 1638574 CAGGCAAAGTCGGTGTGCA 1638556 Score = 118 bits (130), Expect = 1e-20 Identities = 178/251 (71%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||| |||||||| || ||||||||||||||||||| | |||| | ||| ||| Sbjct 1638206 GAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAAAAGCAGCGGGCCTCGGGCACCTGG 1638147 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| |||| || || | ||||||||| |||||||| || ||||||||| Sbjct 1638146 ACCTCGGCGCTGAAGCGCTCGACGAGGTTCTCGTTGACGATGCCATCCGAGGCGGCGAAG 1638087 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809 || || |||| ||| ||| ||| ||||||||||||| | | ||| ||||| | Sbjct 1638086 AAGGCGAGGATGTGGGAGATGAAGAAGCGCTCGTCGTCGTTCAGGCGGTTGTGCCAGTCG 1638027 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 ||| | ||||| | ||||||||| ||||||| || |||||| ||| ||| Sbjct 1638026 TGCAGGTCCTTGGACAGGTCAATCTCCTCGGCCGTCCAGAAAGAAGCCTCGTGCTTCTTG 1637967 Query 869870 TACATCTCCCA 869880 ||||| | ||| Sbjct 1637966 TACATTTGCCA 1637956 Score = 104 bits (114), Expect = 3e-16 Identities = 121/161 (75%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 509034 CGCCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCA-ACTCGCGCGAG 509092 |||||||| ||| |||||||| ||||||||| ||| || || | || | | |||| Sbjct 40309 CGCCCGAGGCCCGTGGCTTTGTCGAGAACTCGTACCTGCGTGGTCTTACACCCAC-CGAG 40367 Query 509093 ATGTTTCTGCACATGATCGGCGGGCGCGAGGGCCTCGTCGACACGGCCGTCAAGACGGCC 509152 | || | ||| || | || ||||| || ||| | ||||||||||||||||||||| Sbjct 40368 TTTTTCTTCCACGCCATGGCTGGTCGCGAAGGTCTCATTGACACGGCCGTCAAGACGGCC 40427 Query 509153 GAGACGGGCTACATCCAGCGCCGGTGCATCAAGTCGATGGA 509193 |||||||| ||||| ||||||||| ||||| || |||| Sbjct 40428 GAGACGGGTTACATTCAGCGCCGGCTGGTCAAGGCGCTGGA 40468 Score = 96.9 bits (106), Expect = 4e-14 Identities = 139/194 (72%), Gaps = 9/194 (5%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| |||| || ||| || | || || ||||| ||||| |||||| Sbjct 1638553 CCCTCGTCGCGGGAAATCAGCTCATTGGAGAAAGTCAGACCAGGCATCAGGCCACGCTTC 1638494 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| ||||||| |||| ||| ||| || |||||||||||||| ||||| Sbjct 1638493 TTGAGCCAGAAGATGGACGAGAAGGCGCCGCTGAAGAAAATGCCCTCGACGGCAGCAAAT 1638434 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTG---ATCCACTTCATCGCC 869356 | | ||| |||| ||||||||| || |||||||| | ||||| || ||| Sbjct 1638433 GCCACGAGGCGCTGCGCAAAGGTG--GA----CTCCTTGTCGGAAATCCAGCGCAGGGCC 1638380 Query 869357 CAGTCGGCCTTTTT 869370 || |||||||| || Sbjct 1638379 CACTCGGCCTTCTT 1638366 Score = 91.5 bits (100), Expect = 2e-12 Identities = 93/119 (78%), Gaps = 3/119 (3%) Strand=Plus/Plus Query 1850303 GCCGTCGGCGTGGCCTATCTGCACGGCACGGCGGGCATCGTCCACCGCGACCTCAAGTCG 1850362 |||| |||||| ||||||||||||| || || || ||| ||||||||||||||||| || Sbjct 1624257 GCCGCCGGCGTCGCCTATCTGCACG--ACCGCTGG-ATCCTCCACCGCGACCTCAAGACG 1624313 Query 1850363 TCCAACCTGCTGGTGACCGACGACTACTCGGTCAAGGTGGCCGACTTTGGCTTTGCGCG 1850421 |||||||||||| | | | || | | ||||| | |||||||||||| | || || Sbjct 1624314 TCCAACCTGCTGCTCAACAACCGCGGCCGCCTCAAGATTGCCGACTTTGGCATGGCCCG 1624372 Score = 87.8 bits (96), Expect = 2e-11 Identities = 93/123 (76%), Gaps = 6/123 (5%) Strand=Plus/Plus Query 1178224 CGCCGCCGGCGTGGCCTATTTGCACGGGCGCGACCGGCCGATCGTGCACCGCGACCTCAA 1178283 |||||||||||| |||||| |||||| |||| |||| | |||||||||||||| Sbjct 1624256 CGCCGCCGGCGTCGCCTATCTGCACG------ACCGCTGGATCCTCCACCGCGACCTCAA 1624309 Query 1178284 GTCGTCCAACCTGCTCGTCGACGACAACTTCACAATCAAGGTGGCCGACTTTGGCTTTGC 1178343 | ||||||||||||| || || || | | ||||| | |||||||||||| | || Sbjct 1624310 GACGTCCAACCTGCTGCTCAACAACCGCGGCCGCCTCAAGATTGCCGACTTTGGCATGGC 1624369 Query 1178344 CCG 1178346 ||| Sbjct 1624370 CCG 1624372 >seq6 Length=1651397 Score = 138 bits (152), Expect = 1e-26 Identities = 319/469 (68%), Gaps = 15/469 (3%) Strand=Plus/Plus Query 1726692 GGGCGGCGGC-GCGC--ACGGCGTCGAGTGCCGTCGCC-ACGCTCCCGTCGGTGCCGTTC 1726747 ||||||| || |||| | |||||| | || || |||| | | | ||||||||||||||| Sbjct 978898 GGGCGGCAGCCGCGCCAATGGCGTCAA-TGGCGACGCCCAGGTTGCCGTCGGTGCCGTTC 978956 Query 1726748 TTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCGGTC 1726807 |||||||||| | | | ||| |||| |||| ||| ||||||| ||||||||| ||| Sbjct 978957 TTGAAGCCGACAGGGAAGGACAGGCCCGAGGCCAGCTCCCGGTGCAGCTGGCTCTCCGTC 979016 Query 1726808 GTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCA-AATAAGGGGCCACCAGAGG 1726866 ||||| ||||| | ||| || || | | ||| |||| | | ||| | | | Sbjct 979017 GTGCGGGCGCCAATGGCACCGACCGAGATGAAGTCGGCCAGGAACTGCGGCGAGATGGTG 979076 Query 1726867 ACTGAGAAACTCGACGGCCACGGGC-TGATCGACGGCGACGACGAGATCGCGCAACAGGC 1726925 | ||| | |||| ||| | |||| | ||| || | || |||| || || Sbjct 979077 TC-GAGCATCTCGCTGGCAATGGGCACGCCCGAGCTCGTC----AGGTCGCAGAAGAGCT 979131 Query 1726926 GGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTCGCTGG 1726985 |||||||| | |||||| | | | | | | | ||||| |||||||||| || Sbjct 979132 GGCGCGACACGCGCAGGCCCTTGTTGATCTTGAAGGTCGAGTCGATGTCGGGGTCGTTGA 979191 Query 1726986 CCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGACCACGC 1727045 |||||||||||| ||||| ||||| |||||||| || | || || ||||||| | | Sbjct 979192 TCAGGCCCTTCCAGCCGACCGTCGTCCGCGGCTTCTCCAGGTACGCCCGCATGATGATGA 979251 Query 1727046 AAAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCGCGCAGGCGTCGGCCATAGTCGACGA 1727105 || ||| ||| ||||| || | | | ||||| || | | || |||||| Sbjct 979252 CCAGGTCGTTCTCGA--GCGTCTTGG-CCAGCTCACGCAGCCGCCCAGCGTACTCGACGG 979308 Query 1727106 CGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGATAACCAGCAGCCG 1727154 | | |||||||||||| ||| || || || || || |||||||| || Sbjct 979309 CCGTCGCCGGGTCGTGGATCGAGCAGGGTCCGACAATGACCAGCAGACG 979357 >seq4 Length=2521912 Score = 131 bits (144), Expect = 2e-24 Identities = 290/425 (68%), Gaps = 10/425 (2%) Strand=Plus/Plus Query 1852174 CTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGC 1852233 ||||||||||||| ||||| |||||| |||||||| | ||||||| |||||||||| Sbjct 1915748 CTTGCGCTGGTCGACGCCGCCGAACTGGACGTCGACGCCCAGGTGCTCCTCGTCGAGGAT 1915807 Query 1852234 CTGCATGAGCGGGTAGAGCACGTTGCTCAGGAGCGGGTTGCGGTCCATCTTGACCACCTG 1852293 ||||| || ||||| |||| | |||||| | | ||| | |||||| |||| Sbjct 1915808 CTGCAGGATGGGGTACAGCAGGCCGCTCAGCGGGGCATTGGCCGACTGCTTGACGACCTC 1915867 Query 1852294 AGCGGCGGCCTTTT--GCGCCGTGC-CGGTGCGCACGTGCGCCGCGAGTCGGTAGAGGTC 1852350 ||| ||||||||| ||| ||||| ||| | ||| |||| ||| ||||||| ||| Sbjct 1915868 GGCGCCGGCCTTTTTGGCGTCGTGCTCGGAGGTGACG-GCGC--AGAGACGGTAGACGTC 1915924 Query 1852351 GAGCGCGTAGGC-GCCGCCGCACTGGTACTCGGTGCCGCGCACAAACTCGAGTCCGCCCA 1852409 | | ||| | | || | |||||| | |||||| ||||| || | || | Sbjct 1915925 CATGACATAGTCGGGCGAC-TTCTGGTAGGACGAGCCGCGGACAAA-GCGCAGCTGCTCG 1915982 Query 1852410 GCG-GCACGCCGATGTGCTGGAGCATGGCCTTGATGGCAAACTCGTACCAGCGGCACCGG 1852468 | | |||| |||| | ||| |||||||| |||| | || ||| || | ||| Sbjct 1915983 GTGCGCACACCGACGGCCTGCAGCATGGCACGGATGACCTGCTGGTAGTAGTCGGTGCGG 1916042 Query 1852469 TGTTCGACCAGGTCCCACGGCGTCTTGCCGTTGTCGAGGTGGGCGTGCACGTCGGCAAAG 1852528 | ||||| || || |||| |||| |||||||||| | |||| | |||||| | Sbjct 1916043 TACTCGACGAGCTCAATGGGCGCCTTGAGGTTGTCGAGGAAGCCGTGGATGTCGGCGAGC 1916102 Query 1852529 AGGATCTTGACCCGACAGCCGGCCTGGAGAAAGTCGGCCAGTTTGAAGATGGGCACAAAG 1852588 |||| |||| |||||||| || || | | ||| | |||| | |||||| | | Sbjct 1916103 AGGACGGTGACGTCGCAGCCGGCGTGCAGCAGCTGGGCGATCTTGATGGCGGGCACGAGG 1916162 Query 1852589 TAGCC 1852593 ||||| Sbjct 1916163 TAGCC 1916167 Score = 95.1 bits (104), Expect = 1e-13 Identities = 124/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 732370 TGCTCGGGGCCTGCGCGTCCATCATCCCGTTCTCCAACCACAACCAGGCGCCGCGCAACA 732429 ||||||| ||| || |||||| || ||| | ||||||||||| ||||||| |||| Sbjct 2219545 TGCTCGGTATCTGTGCCAGCATCATTCCCTTCCCGGACCACAACCAGTCGCCGCGTAACA 2219604 Query 732430 TCTACCAGACGGCCATGGGCAAGCAGAGCAAGGCCGTCGTGTCGCTCAAC-GCCGACCAC 732488 ||||||| |||||||||| |||||| || || || | | |||| || | | Sbjct 2219605 CCTACCAGTCGGCCATGGGTAAGCAGGCCATGGGATTCTTCCTGACCAACTACCCGCGGC 2219664 Query 732489 GCCATCGACACGGTGTCGCACGCCCTGTGCTACCCGCAGGTGCCGCTGG 732537 | ||| |||||| || || ||| |||| |||||||||| |||||||| Sbjct 2219665 G-CATGGACACGATGGCGAACGTGCTGTACTACCCGCAGAAGCCGCTGG 2219712 Score = 93.3 bits (102), Expect = 5e-13 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 450777 GCGCACCGGCCGCGTTTGGCCGATGCGGTGCACGCGGTCGACGGCCTGCGCCTCGGCAAA 450836 ||||||||||||| | ||||| | |||||||||||||||||||||||||||||||| Sbjct 275057 GCGCACCGGCCGCTTCTGGCCCAGCCGGTGCACGCGGTCGACGGCCTGCGCCTCGGCGGC 275116 Query 450837 CGGATTGTAGTGCGCGTCCAT 450857 ||| ||||| |||| ||||| Sbjct 275117 CGGGTTGTACTGCGGCTCCAT 275137 Score = 89.7 bits (98), Expect = 6e-12 Identities = 138/192 (72%), Gaps = 10/192 (5%) Strand=Plus/Plus Query 733083 CCCG-AGTTGGGCGACAAACTGTCGTCGCGCCACGGCCAAAAGGGCACCGTGGGCAGCGT 733141 |||| || | |||||||| | ||||||| ||||| || |||||||| | || || Sbjct 2220221 CCCGCAGATTGGCGACAAGTTTGCGTCGCGACACGGACAGAAGGGCACGATTGGT---GT 2220277 Query 733142 G-CGCTCCA--CCGAGGACATGCCCTGGTCGCCGCGCGGCGGCGCCACGCCCGACATCGT 733198 | || || | ||||||||||| | || | | ||| |||||||||||| | Sbjct 2220278 GACGTACCGTTCGGAGGACATGCCGTTTACGGTG---GAGGGCATCACGCCCGACATTAT 2220334 Query 733199 GATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGCTCGAGGCCCTCCT 733258 ||||||||||||||||| |||||||| ||||| || | | | || ||||| || || Sbjct 2220335 CATCAACCCGCACGCCATTCCGTCGCGTATGACGATTGCCCATTTGATCGAGTGTCTGCT 2220394 Query 733259 GGGCAAGGTGGC 733270 | |||||||||| Sbjct 2220395 GAGCAAGGTGGC 2220406 >seq7 Length=1620073 Score = 129 bits (142), Expect = 7e-24 Identities = 248/358 (69%), Gaps = 7/358 (2%) Strand=Plus/Minus Query 1726685 TGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGC-TCCCGTCGGTGCC 1726743 ||||| || | ||||||| | |||||| | ||| |||| || | ||||||||||| Sbjct 476269 TGCGGGTGCTTGACGGCGCGGATGGCGTCAATGGCCA-CGCCCAGCGTGCCGTCGGTGCC 476211 Query 1726744 GTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTC 1726803 |||||||||||||| || | | ||| |||| |||| ||||||||||| ||||||||| Sbjct 476210 GTTCTTGAAGCCGACGGGGAAGGACAGGCCCGAGGCCAGCTCGCGGTGCAGCTGGCTCTC 476151 Query 1726804 GGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCA-AATAAGGGGCCACCA 1726862 ||| ||||| ||||| |||||||| || || |||||| |||| | | ||| | Sbjct 476150 GGTGGTGCGGGCGCCGACGGCGCCGACCGACAGCAGGTCGGCCAGGAACTGCGGCGAGAT 476091 Query 1726863 GAGGACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCAACA 1726922 | | | ||| | |||| ||| | |||| || | || | | || ||| || | Sbjct 476090 GGTGTC-GAGCATCTCGCTGGCAATGGGC--AT-GCCGCGGCTGGTCAGGTCGACAAAGA 476035 Query 1726923 GGCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTCGC 1726982 | | |||||| |||||| | | | || | ||| | ||| ||||| Sbjct 476034 GCTGCCGCGACATGCGCAGGCCCTTGTTGATCTGGAAGCTGTTGTCAATGTCCGGGTCAT 475975 Query 1726983 TGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGAC 1727040 || |||||||||||| |||||||| ||||||||||| || | || | ||||||||| Sbjct 475974 TGATCAGGCCCTTCCAGCCGACGGTGGTGCGCGGCTTCTCCAGGTACGAGCGCATGAC 475917 >seq3 Length=3655701 Score = 116 bits (128), Expect = 5e-20 Identities = 185/261 (71%), Gaps = 6/261 (2%) Strand=Plus/Plus Query 1574004 GGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGAC-CTGCC 1574062 ||| ||||||| ||||| || |||||| | || |||| | | ||| ||||| Sbjct 2536818 GGCATCGACGTGGTGCGGAACCGGATCAAGGGCTTTGCGCAGAAGAAGGT-GACGCTGCC 2536876 Query 1574063 GCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCA 1574122 | | ||||| |||||| | | || || |||||||| ||| || | ||||||| ||| || Sbjct 2536877 GGCGGGACGGCACAAGATTGTGATTCTGGACGAGGCGGACAGCATGACGTCGGGGGCGCA 2536936 Query 1574123 GCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTG 1574182 |||||| |||||| || ||||| | || | ||||||||||| ||||| | ||||| Sbjct 2536937 GCAGGCGCTGCGGCGGACGATGGAGATCTACTCGAACACGACGCGGTTTGCGTTTGCGTG 2536996 Query 1574183 CAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGC--TGCGCCATTCTGCGCTTT 1574240 |||| |||| | | |||| ||| | || | |||||| || || |||||||| | Sbjct 2536997 CAACCAGTCGAACAAGATCATTGAGCCGCTGC--AGTCGCGGTGTGCGATTCTGCGGTAC 2537054 Query 1574241 GTGCGCCTGGGTGACGCCCAG 1574261 | ||| ||| ||||| ||| Sbjct 2537055 GCGCGGCTGACGGACGCGCAG 2537075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107137066318242