Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercivora_20[genbank_20GCA_5F001662465.1_202016-06-08]
26 sequences; 25,862,907 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq2 89.7 4e-13
>seq2
Length=4288194
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||| |||||||| || || || ||||| || ||||| | || ||| |
Sbjct 328904 ATGCAAATCTTTGTCAAGACCTTGACGGGCAAGACGATTACGTTGGAGGTTGAGTCGTCG 328963
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || | | | | || || ||||| || || || ||| | || || |||
Sbjct 328964 GACACGATTGACAACGTCAAGAGCAAGATCCAAGACAAGGAGGGCATCCCGCCAGACCAG 329023
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | || |||| |||||| || ||| |||| |||| | || || | |||||||||
Sbjct 329024 CAGCGCCTGATTTTTGCGGGCAAGCAGTTGGAAGACGGCCGGACGCTGTCCGACTACAAC 329083
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||| |||||||| ||| ||||| ||||| || | |||| || ||
Sbjct 329084 ATTCAGAAGGAGTCGACGCTGCACTTGGTGCTGCGTCTGCGTGGTGG 329130
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398876673605914
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |